FFCP PHASE1:Hg19::chr2:239016429..239016447,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339768 | |EntrezGene=339768 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=27937 | |HGNC=27937 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010fyw.2_5end | |association_with_transcript=0bp_to_uc010fyw.2_5end | ||
|cluster_id=chr2:239016429..239016447,+ | |||
|coexpression_cluster_id=C282 | |coexpression_cluster_id=C282 | ||
|description=CAGE_peak_4_at_ESPNL_5end | |description=CAGE_peak_4_at_ESPNL_5end | ||
|id=chr2:239016429..239016447,+ | |id=chr2:239016429..239016447,+ | ||
|ontology_enrichment_celltype=CL:0000945;1.98e-28;24!CL:0000785;6.43e-16;1!CL:0000819;6.43e-16;1!CL:0000542;1.64e-12;53!CL:0000236;1.64e-10;13 | |ontology_enrichment_celltype=CL:0000945!2.76e-33!24;CL:0000826!2.76e-33!24;CL:0000542!3.83e-15!53;CL:0000051!3.83e-15!53;CL:0000838!2.15e-13!52;CL:0000236!5.21e-13!14;CL:0002087!4.15e-09!119;CL:0000181!1.16e-07!12;CL:0000417!1.16e-07!12;CL:0000668!1.16e-07!12;CL:0000414!1.16e-07!12;CL:0000412!1.16e-07!12;CL:0000182!1.16e-07!12;CL:0000738!4.79e-07!140 | ||
| | |ontology_enrichment_celltype_v019=CL:0000945;1.98e-28;24!CL:0000785;6.43e-16;1!CL:0000819;6.43e-16;1!CL:0000542;1.64e-12;53!CL:0000236;1.64e-10;13 | ||
|ontology_enrichment_disease=DOID:12603;5.55e-16;1!DOID:0060073;6.43e-16;1!DOID:8675;6.43e-16;1!DOID:630;1.66e-15;1!DOID:0050177;1.66e-15;1!DOID:0050427;1.66e-15;1 | |ontology_enrichment_celltype_v019_2=CL:0000945,1.49e-28,24;CL:0000826,1.49e-28,24;CL:0000542,1.43e-16,53;CL:0000051,1.43e-16,53;CL:0000819,6.44e-16,1;CL:0000838,5.94e-13,52;CL:0000236,6.63e-10,14;CL:0002087,4.47e-09,115;CL:0000785,1.29e-08,2;CL:0000955,1.29e-08,2;CL:0000818,1.29e-08,2;CL:0000954,1.29e-08,2;CL:0000816,1.29e-08,2;CL:0000738,1.55e-07,136;CL:0002031,8.36e-07,120 | ||
|ontology_enrichment_uberon=UBERON:0001154;1.66e-15;1!UBERON:0001153;1.66e-15;1!UBERON:0009854;1.66e-15;1!UBERON:0001155;3.14e-07;9!UBERON:0001638;3.14e-07;9!UBERON:0003920;3.14e-07;9!UBERON:0004582;3.14e-07;9 | |ontology_enrichment_development_v019=UBERON:0001045;1.66e-15;1!CL:0000051;1.64e-12;53!CL:0000954;1.29e-08;2!UBERON:0006965;2.07e-08;2 | ||
|ontology_enrichment_disease=DOID:0060058!2.01e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:12603;5.55e-16;1!DOID:0060073;6.43e-16;1!DOID:8675;6.43e-16;1!DOID:630;1.66e-15;1!DOID:0050177;1.66e-15;1!DOID:0050427;1.66e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,5.56e-16,1;DOID:0060073,6.44e-16,1;DOID:8675,6.44e-16,1;DOID:630,2.75e-15,1;DOID:0050177,2.75e-15,1;DOID:0050427,2.75e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0005057!1.52e-12!26;UBERON:0002106!5.11e-12!3;UBERON:0004854!5.11e-12!3;UBERON:0009034!5.11e-12!3;UBERON:0002095!5.11e-12!3;UBERON:0004782!5.11e-12!3;UBERON:0003281!5.11e-12!3;UBERON:0009664!5.11e-12!3;UBERON:0002296!5.11e-12!3;UBERON:0005602!5.11e-12!3;UBERON:0001179!5.11e-12!3;UBERON:0006293!5.11e-12!3;UBERON:0004177!9.72e-09!7;UBERON:0009854!3.19e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.66e-15;1!UBERON:0001153;1.66e-15;1!UBERON:0009854;1.66e-15;1!UBERON:0001155;3.14e-07;9!UBERON:0001638;3.14e-07;9!UBERON:0003920;3.14e-07;9!UBERON:0004582;3.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.06e-15,1;UBERON:0001153,2.06e-15,1;UBERON:0001045,2.06e-15,1;UBERON:0001155,2.77e-07,9;UBERON:0001638,3.55e-07,9;UBERON:0003920,3.55e-07,9;UBERON:0004582,3.55e-07,9 | |||
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| ||
|short_description=p4@ESPNL | |short_description=p4@ESPNL | ||
}} | }} |
Latest revision as of 05:28, 16 September 2015
Short description: | p4@ESPNL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ESPNL_5end |
Coexpression cluster: | C282_acute_B_tonsil_CD19_submaxillary_lymph_throat |
Association with transcript: | 0bp_to_uc010fyw.2_5end |
EntrezGene: | ESPNL |
HGNC: | 27937 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.49e-28 | 24 |
pro-B cell | 1.49e-28 | 24 |
lymphocyte | 1.43e-16 | 53 |
common lymphoid progenitor | 1.43e-16 | 53 |
B-1 B cell | 6.44e-16 | 1 |
lymphoid lineage restricted progenitor cell | 5.94e-13 | 52 |
B cell | 6.63e-10 | 14 |
nongranular leukocyte | 4.47e-09 | 115 |
mature B cell | 1.29e-08 | 2 |
pre-B-II cell | 1.29e-08 | 2 |
transitional stage B cell | 1.29e-08 | 2 |
small pre-B-II cell | 1.29e-08 | 2 |
immature B cell | 1.29e-08 | 2 |
leukocyte | 1.55e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 8.36e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 2.06e-15 | 1 |
caecum | 2.06e-15 | 1 |
midgut | 2.06e-15 | 1 |
colon | 2.77e-07 | 9 |
vein | 3.55e-07 | 9 |
venous blood vessel | 3.55e-07 | 9 |
venous system | 3.55e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 5.56e-16 | 1 |
lymphatic system cancer | 6.44e-16 | 1 |
lymphosarcoma | 6.44e-16 | 1 |
genetic disease | 2.75e-15 | 1 |
monogenic disease | 2.75e-15 | 1 |
xeroderma pigmentosum | 2.75e-15 | 1 |