Personal tools

FFCP PHASE1:Hg19::chr6:152128782..152128803,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=2099
|EntrezGene=2099
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=3467
|HGNC=3467
|TSSclassifier=strong
|UniProt=Q9H2M1,P03372
|UniProt=Q9H2M1,P03372
|association_with_transcript=-10bp_to_ENST00000406599,NM_000125,uc003qoo.3,uc010kiq.2,uc010kir.2_5end
|association_with_transcript=-10bp_to_ENST00000406599,NM_000125,uc003qoo.3,uc010kiq.2,uc010kir.2_5end
|cluster_id=chr6:152128782..152128803,+
|coexpression_cluster_id=C233
|description=CAGE_peak_5_at_ESR1_5end
|description=CAGE_peak_5_at_ESR1_5end
|id=chr6:152128782..152128803,+
|id=chr6:152128782..152128803,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=CL:0000136;4.33e-10;13!CL:0002601;4.15e-09;1
|ontology_enrichment_celltype_v019_2=CL:0002601,3.53e-09,1;CL:0000136,9.55e-09,15
|ontology_enrichment_development_v019=UBERON:0005795;5.23e-20;10!UBERON:0004874;2.45e-09;1
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:5093;3.46e-19;4!DOID:1612;3.46e-19;4!DOID:299;6.59e-15;25
|ontology_enrichment_disease_v019_2=DOID:5093,3.35e-19,4;DOID:1612,3.35e-19,4;DOID:299,6.31e-15,25
|ontology_enrichment_uberon=UBERON:0004175!4.24e-16!25;UBERON:0005156!2.37e-15!59;UBERON:0000990!2.37e-15!59;UBERON:0005795!1.18e-13!22;UBERON:0003133!2.43e-13!48;UBERON:0007023!7.27e-13!115;UBERON:0000995!6.51e-12!21;UBERON:0003975!2.99e-11!22;UBERON:0003101!8.11e-09!22;UBERON:0000079!8.11e-09!22;UBERON:0006947!3.22e-08!3;UBERON:0004054!3.22e-08!3;UBERON:0003134!3.95e-08!37;UBERON:0000474!3.95e-08!37;UBERON:0003135!1.91e-07!11;UBERON:0003100!4.83e-07!41
|ontology_enrichment_uberon=UBERON:0004175!4.24e-16!25;UBERON:0005156!2.37e-15!59;UBERON:0000990!2.37e-15!59;UBERON:0005795!1.18e-13!22;UBERON:0003133!2.43e-13!48;UBERON:0007023!7.27e-13!115;UBERON:0000995!6.51e-12!21;UBERON:0003975!2.99e-11!22;UBERON:0003101!8.11e-09!22;UBERON:0000079!8.11e-09!22;UBERON:0006947!3.22e-08!3;UBERON:0004054!3.22e-08!3;UBERON:0003134!3.95e-08!37;UBERON:0000474!3.95e-08!37;UBERON:0003135!1.91e-07!11;UBERON:0003100!4.83e-07!41
|ontology_enrichment_uberon_v019=UBERON:0004175;5.54e-18;21!UBERON:0000995;1.62e-16;17!UBERON:0003975;1.42e-15;18!UBERON:0000310;1.92e-13;10!UBERON:0001443;3.08e-12;11!UBERON:0003134;6.45e-10;33!UBERON:0006834;8.67e-10;1!UBERON:0005795;9.43e-10;1!UBERON:0001301;1.43e-09;1!UBERON:0003133;2.33e-09;44!UBERON:0000989;2.45e-09;1!UBERON:0008811;2.45e-09;1!UBERON:0002171;4.15e-09;1!UBERON:0006518;4.15e-09;1!UBERON:0008949;4.15e-09;1!UBERON:0000101;4.15e-09;1!UBERON:0002167;4.15e-09;1!UBERON:0000474;2.60e-08;37
|ontology_enrichment_uberon_v019_2=UBERON:0005795,3.26e-17,22;UBERON:0004175,5.20e-15,25;UBERON:0000310,1.89e-13,10;UBERON:0000995,2.61e-13,21;UBERON:0003975,1.10e-12,22;UBERON:0001443,3.04e-12,11;UBERON:0003133,3.13e-12,48;UBERON:0003134,7.22e-10,37;UBERON:0000474,7.22e-10,37;UBERON:0006834,8.68e-10,1;UBERON:0005156,1.06e-09,59;UBERON:0000990,1.06e-09,59;UBERON:0001301,1.43e-09,1;UBERON:0000989,2.16e-09,1;UBERON:0008811,2.16e-09,1;UBERON:0006258,2.16e-09,1;UBERON:0005876,2.16e-09,1;UBERON:0004874,2.16e-09,1;UBERON:0002171,5.28e-09,1;UBERON:0006518,5.28e-09,1;UBERON:0008949,5.28e-09,1;UBERON:0000101,5.28e-09,1;UBERON:0002167,5.28e-09,1;UBERON:0003100,7.90e-09,41
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73290365168481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90204397959275,9.4433477830436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77380532035299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24568648489864,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,1.99613798001194,3.38556089410803,0,6.52499617891314,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.975966209950223,22.007773932086,0.113942055847001,0,0,0,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0,1.38847790668105,0.195984794828755,0,4.71762004253481,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.391102765469606,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,2.17199840701485,0,0.653174720218818,0,0,0,0,0,0,0,0,0,1.40963004463334,0.106787412567695,0,1.24271716604159,0,0.197611631897944,0,0,5.44017803369474,1.2534494701135,3.36980134439808,2.29510841496863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,3.1588337906688,0,0,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,1.59363533945908,0.0887023701626388,0,0,0,0,0,0.444925607568277,0.470958557103084,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0,0,0,0,0,0.423387050190929,1.8328549483524,0.31020638566432,0,0,0,0,0.647428837187895,0.513314034281235,0,0,0,0,0,0,0,0,0,0,0,0.980593287015622,0,0.196308467114945,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0.454672189309436,0,0,0,0.426467963801962,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.134704106029175,0,0.332660356546013,0.162806537221949,0,0,0,0,19.3141481808929,16.6827433109453,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73290365168481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90204397959275,9.4433477830436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77380532035299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24568648489864,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,1.99613798001194,3.38556089410803,0,6.52499617891314,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.975966209950223,22.007773932086,0.113942055847001,0,0,0,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0,1.38847790668105,0.195984794828755,0,4.71762004253481,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.391102765469606,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,2.17199840701485,0,0.653174720218818,0,0,0,0,0,0,0,0,0,1.40963004463334,0.106787412567695,0,1.24271716604159,0,0.197611631897944,0,0,5.44017803369474,1.2534494701135,3.36980134439808,2.29510841496863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,3.1588337906688,0,0,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,1.59363533945908,0.0887023701626388,0,0,0,0,0,0.444925607568277,0.470958557103084,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0,0,0,0,0,0.423387050190929,1.8328549483524,0.31020638566432,0,0,0,0,0.647428837187895,0.513314034281235,0,0,0,0,0,0,0,0,0,0,0,0.980593287015622,0,0.196308467114945,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0.454672189309436,0,0,0,0.426467963801962,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.134704106029175,0,0.332660356546013,0.162806537221949,0,0,0,0,19.3141481808929,16.6827433109453,0,0,0
|short_description=p5@ESR1
|short_description=p5@ESR1
}}
}}

Latest revision as of 05:51, 16 September 2015

Short description:p5@ESR1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_5_at_ESR1_5end
Coexpression cluster:C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7
Association with transcript: -10bp_to_ENST00000406599, NM_000125, uc003qoo.3, uc010kiq.2, uc010kir.2_5end
EntrezGene:ESR1
HGNC: 3467
UniProt: Q9H2M1P03372
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
5
10
15
20
25




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr6:152128782..152128803,%2B&oldid=4027745"