FFCP PHASE1:Hg19::chr6:152128810..152128827,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=2099 | |EntrezGene=2099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=3467 | |HGNC=3467 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9H2M1,P03372 | |UniProt=Q9H2M1,P03372 | ||
|association_with_transcript=0bp_to_ENST00000406599,NM_000125,uc003qoo.3,uc010kiq.2,uc010kir.2_5end | |association_with_transcript=0bp_to_ENST00000406599,NM_000125,uc003qoo.3,uc010kiq.2,uc010kir.2_5end | ||
|cluster_id=chr6:152128810..152128827,+ | |||
|coexpression_cluster_id=C233 | |coexpression_cluster_id=C233 | ||
|description=CAGE_peak_2_at_ESR1_5end | |description=CAGE_peak_2_at_ESR1_5end | ||
Latest revision as of 05:52, 16 September 2015
| Short description: | p2@ESR1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_ESR1_5end |
| Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
| Association with transcript: | 0bp_to_ENST00000406599, NM_000125, uc003qoo.3, uc010kiq.2, uc010kir.2_5end |
| EntrezGene: | ESR1 |
| HGNC: | 3467 |
| UniProt: | Q9H2M1P03372 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@ESR1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fat cell | 8.20e-08 | 15 |
| epithelial cell of uterus | 1.94e-07 | 6 |
| stromal cell of endometrium | 1.94e-07 | 6 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| internal genitalia | 1.88e-24 | 25 |
| reproductive organ | 5.38e-24 | 48 |
| reproductive structure | 3.09e-21 | 59 |
| reproductive system | 3.09e-21 | 59 |
| embryonic uterus | 6.89e-16 | 22 |
| internal female genitalia | 9.90e-16 | 22 |
| male genital duct | 1.27e-14 | 3 |
| internal male genitalia | 1.27e-14 | 3 |
| male reproductive organ | 1.48e-14 | 11 |
| uterus | 4.06e-13 | 21 |
Showing 1 to 10 of 19 entries
| Ontology term | p-value | n |
|---|---|---|
| thoracic cancer | 1.11e-11 | 4 |
| breast cancer | 1.11e-11 | 4 |
| adenocarcinoma | 2.32e-08 | 25 |
| female reproductive endometrioid cancer | 1.94e-07 | 6 |
Showing 1 to 4 of 4 entries
