FFCP PHASE1:Hg19::chr14:77965643..77965654,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=145501 | |EntrezGene=145501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23176 | |HGNC=23176 | ||
|TSSclassifier=strong | |||
|UniProt=Q6H9L7 | |UniProt=Q6H9L7 | ||
|association_with_transcript=-433bp_to_ENST00000412904,ENST00000429906,NM_182509,NM_199296,uc001xty.2,uc001xtz.2,uc001xua.2,uc010tvl.1_5end | |association_with_transcript=-433bp_to_ENST00000412904,ENST00000429906,NM_182509,NM_199296,uc001xty.2,uc001xtz.2,uc001xua.2,uc010tvl.1_5end | ||
|cluster_id=chr14:77965643..77965654,- | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_8_at_ISM2_5end | |description=CAGE_peak_8_at_ISM2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!4.33e-33!3;CL:0000039!2.65e-14!7;CL:0000586!2.65e-14!7 | |ontology_enrichment_celltype=CL:0002541!4.33e-33!3;CL:0000039!2.65e-14!7;CL:0000586!2.65e-14!7 | ||
|ontology_enrichment_celltype_v019=CL:0002541;4.26e-118;3!CL:0000349;1.44e-19;19!CL:0000083;3.10e-11;4!CL:0000039;6.21e-07;7!CL:0000586;6.21e-07;7 | |ontology_enrichment_celltype_v019=CL:0002541;4.26e-118;3!CL:0000349;1.44e-19;19!CL:0000083;3.10e-11;4!CL:0000039;6.21e-07;7!CL:0000586;6.21e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.20e-118,3;CL:0000349,1.48e-19,19;CL:0000083,3.10e-11,4;CL:0000039,6.04e-07,7;CL:0000586,6.04e-07,7 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1799!3.27e-12!1;DOID:10165!3.27e-12!1;DOID:1798!3.27e-12!1;DOID:3095!7.26e-12!22;DOID:2994!7.26e-12!22;DOID:170!4.66e-08!6 | |ontology_enrichment_disease=DOID:1799!3.27e-12!1;DOID:10165!3.27e-12!1;DOID:1798!3.27e-12!1;DOID:3095!7.26e-12!22;DOID:2994!7.26e-12!22;DOID:170!4.66e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.48e-40;1!DOID:10165;1.48e-40;1!DOID:1798;1.48e-40;1!DOID:1793;3.10e-11;4!DOID:170;6.34e-08;6 | |ontology_enrichment_disease_v019=DOID:1799;1.48e-40;1!DOID:10165;1.48e-40;1!DOID:1798;1.48e-40;1!DOID:1793;3.10e-11;4!DOID:170;6.34e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,1.48e-40,1;DOID:10165,1.48e-40,1;DOID:1798,1.48e-40,1;DOID:1793,3.10e-11,4;DOID:170,6.34e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000476!4.33e-33!3;UBERON:0000920!4.33e-33!3;UBERON:0003124!6.51e-25!7;UBERON:0005631!3.66e-19!14;UBERON:0000158!3.66e-19!14;UBERON:0000478!3.81e-11!24 | |ontology_enrichment_uberon=UBERON:0000476!4.33e-33!3;UBERON:0000920!4.33e-33!3;UBERON:0003124!6.51e-25!7;UBERON:0005631!3.66e-19!14;UBERON:0000158!3.66e-19!14;UBERON:0000478!3.81e-11!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.26e-118;3!UBERON:0000920;4.26e-118;3!UBERON:0005631;2.87e-36;10!UBERON:0000158;2.87e-36;10!UBERON:0000478;1.10e-15;24 | |ontology_enrichment_uberon_v019=UBERON:0003124;4.26e-118;3!UBERON:0000920;4.26e-118;3!UBERON:0005631;2.87e-36;10!UBERON:0000158;2.87e-36;10!UBERON:0000478;1.10e-15;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.20e-118,3;UBERON:0003124,2.73e-51,7;UBERON:0005631,3.45e-26,14;UBERON:0000158,3.45e-26,14;UBERON:0000478,1.13e-15,24 | |||
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|short_description=p8@ISM2 | |short_description=p8@ISM2 | ||
}} | }} |
Latest revision as of 06:24, 16 September 2015
Short description: | p8@ISM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ISM2_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -433bp_to_ENST00000412904, ENST00000429906, NM_182509, NM_199296, uc001xty.2, uc001xtz.2, uc001xua.2, uc010tvl.1_5end |
EntrezGene: | ISM2 |
HGNC: | 23176 |
UniProt: | Q6H9L7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.20e-118 | 3 |
extraembryonic cell | 1.48e-19 | 19 |
epithelial cell of pancreas | 3.10e-11 | 4 |
germ line cell | 6.04e-07 | 7 |
germ cell | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.20e-118 | 3 |
chorion | 2.73e-51 | 7 |
extraembryonic membrane | 3.45e-26 | 14 |
membranous layer | 3.45e-26 | 14 |
extraembryonic structure | 1.13e-15 | 24 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.48e-40 | 1 |
endocrine pancreas cancer | 1.48e-40 | 1 |
pancreatic endocrine carcinoma | 1.48e-40 | 1 |
pancreatic cancer | 3.10e-11 | 4 |
endocrine gland cancer | 6.34e-08 | 6 |