FFCP PHASE1:Hg19::chr2:109237631..109237648,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3987 | |EntrezGene=3987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6616 | |HGNC=6616 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z907 | |UniProt=B7Z907 | ||
|association_with_transcript=-53bp_to_NM_001193484,uc002tej.2_5end | |||
|cluster_id=chr2:109237631..109237648,+ | |||
|coexpression_cluster_id=C854 | |||
|description=CAGE_peak_22_at_LIMS1_5end | |||
|id=chr2:109237631..109237648,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.46e-07!52;CL:0000542!4.25e-07!53;CL:0000051!4.25e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0002553;8.13e-11;1!CL:0000167;2.87e-10;1!CL:0000164;2.87e-10;1!CL:0000502;2.87e-10;1!CL:0000172;2.87e-10;1!CL:0000173;2.87e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,8.14e-11,1;CL:0000167,3.96e-10,1;CL:0000164,3.96e-10,1;CL:0000502,3.96e-10,1;CL:0000172,3.96e-10,1;CL:0000173,3.96e-10,1;CL:0002351,3.96e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0005754;8.94e-11;1!CL:0002351;2.87e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;2.87e-10;1!DOID:169;7.30e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,3.96e-10,1;DOID:169,7.98e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;8.94e-11;1!UBERON:0006868;8.94e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,8.95e-11,1;UBERON:0006868,8.95e-11,1 | |||
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| ||
|short_description=p22@LIMS1 | |||
}} | }} |
Latest revision as of 06:31, 16 September 2015
Short description: | p22@LIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_LIMS1_5end |
Coexpression cluster: | C854_argyrophil_CD4_anaplastic_smallcell_nonsmall_seminal_CD8 |
Association with transcript: | -53bp_to_NM_001193484, uc002tej.2_5end |
EntrezGene: | LIMS1 |
HGNC: | 6616 |
UniProt: | B7Z907 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 8.14e-11 | 1 |
peptide hormone secreting cell | 3.96e-10 | 1 |
enteroendocrine cell | 3.96e-10 | 1 |
type D enteroendocrine cell | 3.96e-10 | 1 |
somatostatin secreting cell | 3.96e-10 | 1 |
pancreatic D cell | 3.96e-10 | 1 |
progenitor cell of endocrine pancreas | 3.96e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 8.95e-11 | 1 |
seminal fluid secreting gland | 8.95e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.96e-10 | 1 |
neuroendocrine tumor | 7.98e-07 | 6 |