FFCP PHASE2:Hg19::chr17:53499150..53499161,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:23531 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:7153 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=23531 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7153 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q15546 | ||
|association_with_transcript=179bp_to_ENST00000262065,NM_012329,uc002iui.2_5end | |association_with_transcript=179bp_to_ENST00000262065,NM_012329,uc002iui.2_5end | ||
|cluster_id=chr17:53499150..53499161,- | |cluster_id=chr17:53499150..53499161,- |
Latest revision as of 07:06, 16 September 2015
Short description: | p4@MMD |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MMD_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 179bp_to_ENST00000262065, NM_012329, uc002iui.2_5end |
EntrezGene: | MMD |
HGNC: | 7153 |
UniProt: | Q15546 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@MMD |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fat cell | 4.57e-27 | 15 |
annulus pulposus cell | 4.49e-11 | 2 |
skeletal muscle satellite cell | 4.70e-08 | 3 |
subcutaneous fat cell | 7.65e-08 | 3 |
adipocyte of omentum tissue | 7.65e-08 | 3 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
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annulus fibrosus | 4.49e-11 | 2 |
fibrocartilage | 4.49e-11 | 2 |
annulus fibrosus disci intervertebralis | 4.49e-11 | 2 |
intervertebral cartilage | 8.10e-10 | 5 |
symphysis | 8.10e-10 | 5 |
nonsynovial joint | 8.10e-10 | 5 |
fibrous joint | 8.10e-10 | 5 |
cartilaginous joint | 8.10e-10 | 5 |
developing mesenchymal condensation | 8.10e-10 | 5 |
pre-cartilage condensation | 8.10e-10 | 5 |
Showing 1 to 10 of 28 entries