FFCP PHASE1:Hg19::chr1:115238232..115238241,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=270 | |EntrezGene=270 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=468 | |HGNC=468 | ||
|TSSclassifier=strong | |||
|UniProt=P23109,Q5TF02,F2Z3B3,B2RAM1 | |UniProt=P23109,Q5TF02,F2Z3B3,B2RAM1 | ||
|association_with_transcript=0bp_to_ENST00000353928,ENST00000369538,NM_000036,NM_001172626_5end | |association_with_transcript=0bp_to_ENST00000353928,ENST00000369538,NM_000036,NM_001172626_5end | ||
|cluster_id=chr1:115238232..115238241,- | |||
|description=CAGE_peak_3_at_AMPD1_5end | |description=CAGE_peak_3_at_AMPD1_5end | ||
|id=chr1:115238232..115238241,- | |id=chr1:115238232..115238241,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.37e-29;1!UBERON:0004874;2.37e-29;1!UBERON:0008814;2.05e-15;2!UBERON:0010056;2.05e-15;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.70e-29!115;UBERON:0001829!3.50e-11!2;UBERON:0000341!7.73e-11!2;UBERON:0000078!1.47e-09!18;UBERON:0000166!4.25e-08!21;UBERON:0001044!4.54e-08!6;UBERON:0003293!4.54e-08!6;UBERON:0003294!4.54e-08!6;UBERON:0010047!4.54e-08!6;UBERON:0000167!4.54e-08!6;UBERON:0001723!7.71e-08!3;UBERON:0001033!7.71e-08!3;UBERON:0010056!7.71e-08!3;UBERON:0002106!3.21e-07!3;UBERON:0004854!3.21e-07!3;UBERON:0009034!3.21e-07!3;UBERON:0002095!3.21e-07!3;UBERON:0004782!3.21e-07!3;UBERON:0003281!3.21e-07!3;UBERON:0009664!3.21e-07!3;UBERON:0002296!3.21e-07!3;UBERON:0005602!3.21e-07!3;UBERON:0001179!3.21e-07!3;UBERON:0006293!3.21e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!5.70e-29!115;UBERON:0001829!3.50e-11!2;UBERON:0000341!7.73e-11!2;UBERON:0000078!1.47e-09!18;UBERON:0000166!4.25e-08!21;UBERON:0001044!4.54e-08!6;UBERON:0003293!4.54e-08!6;UBERON:0003294!4.54e-08!6;UBERON:0010047!4.54e-08!6;UBERON:0000167!4.54e-08!6;UBERON:0001723!7.71e-08!3;UBERON:0001033!7.71e-08!3;UBERON:0010056!7.71e-08!3;UBERON:0002106!3.21e-07!3;UBERON:0004854!3.21e-07!3;UBERON:0009034!3.21e-07!3;UBERON:0002095!3.21e-07!3;UBERON:0004782!3.21e-07!3;UBERON:0003281!3.21e-07!3;UBERON:0009664!3.21e-07!3;UBERON:0002296!3.21e-07!3;UBERON:0005602!3.21e-07!3;UBERON:0001179!3.21e-07!3;UBERON:0006293!3.21e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.64e-38;3!UBERON:0001033;2.64e-38;3!UBERON:0000989;2.37e-29;1!UBERON:0001736;2.37e-29;1!UBERON:0008811;2.37e-29;1!UBERON:0001829;2.05e-15;2!UBERON:0000165;8.81e-10;28!UBERON:0001134;4.42e-08;16!UBERON:0002036;4.42e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,3.86e-38,3;UBERON:0001033,3.86e-38,3;UBERON:0010056,3.86e-38,3;UBERON:0000989,1.33e-29,1;UBERON:0008811,1.33e-29,1;UBERON:0006258,1.33e-29,1;UBERON:0005876,1.33e-29,1;UBERON:0004874,1.33e-29,1;UBERON:0001736,1.78e-29,1;UBERON:0006298,1.78e-29,1;UBERON:0001829,1.78e-15,2;UBERON:0000166,3.08e-12,22;UBERON:0001042,3.15e-12,10;UBERON:0009145,3.15e-12,10;UBERON:0006562,3.30e-11,11;UBERON:0000165,1.87e-09,29;UBERON:0000930,1.87e-09,29;UBERON:0000161,9.60e-08,36;UBERON:0008814,3.24e-07,18;UBERON:0001557,6.97e-07,19 | |||
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|short_description=p3@AMPD1 | |short_description=p3@AMPD1 | ||
}} | }} |
Latest revision as of 07:18, 16 September 2015
Short description: | p3@AMPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AMPD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000353928, ENST00000369538, NM_000036, NM_001172626_5end |
EntrezGene: | AMPD1 |
HGNC: | 468 |
UniProt: | P23109Q5TF02F2Z3B3B2RAM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 3.86e-38 | 3 |
gustatory system | 3.86e-38 | 3 |
future tongue | 3.86e-38 | 3 |
penis | 1.33e-29 | 1 |
intromittent organ | 1.33e-29 | 1 |
lateral plate mesenchyme | 1.33e-29 | 1 |
undifferentiated genital tubercle | 1.33e-29 | 1 |
somatopleure | 1.33e-29 | 1 |
submandibular gland | 1.78e-29 | 1 |
submandibular gland primordium | 1.78e-29 | 1 |
major salivary gland | 1.78e-15 | 2 |
oral opening | 3.08e-12 | 22 |
chordate pharynx | 3.15e-12 | 10 |
pharyngeal region of foregut | 3.15e-12 | 10 |
pharynx | 3.30e-11 | 11 |
mouth | 1.87e-09 | 29 |
stomodeum | 1.87e-09 | 29 |
orifice | 9.60e-08 | 36 |
pharyngeal arch system | 3.24e-07 | 18 |
upper respiratory tract | 6.97e-07 | 19 |