FFCP PHASE1:Hg19::chr12:11035682..11035705,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11272 | |EntrezGene=11272 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18020 | |HGNC=18020 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000543480_5end | |association_with_transcript=0bp_to_ENST00000543480_5end | ||
|cluster_id=chr12:11035682..11035705,- | |||
|coexpression_cluster_id=C70 | |coexpression_cluster_id=C70 | ||
|description=CAGE_peak_4_at_PRR4_5end | |description=CAGE_peak_4_at_PRR4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.23e-66;1!UBERON:0006298;2.39e-66;1!UBERON:0006601;8.58e-07;82 | |ontology_enrichment_development_v019=UBERON:0008801;1.23e-66;1!UBERON:0006298;2.39e-66;1!UBERON:0006601;8.58e-07;82 | ||
|ontology_enrichment_disease=DOID:3112!1.16e-15!1 | |ontology_enrichment_disease=DOID:3112!1.16e-15!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!4.49e-30!2;UBERON:0001044!1.97e-22!6;UBERON:0003293!1.97e-22!6;UBERON:0003294!1.97e-22!6;UBERON:0010047!1.97e-22!6;UBERON:0000167!1.97e-22!6;UBERON:0000078!5.64e-20!18;UBERON:0000166!3.93e-17!21;UBERON:0001831!5.56e-16!1;UBERON:0001567!5.56e-16!1;UBERON:0008801!5.56e-16!1;UBERON:0001736!6.44e-16!1;UBERON:0006298!6.44e-16!1;UBERON:0002372!3.17e-15!1;UBERON:0001961!3.17e-15!1;UBERON:0001744!3.17e-15!1;UBERON:0001735!3.17e-15!1;UBERON:0003408!1.00e-13!10;UBERON:0000165!7.40e-13!28;UBERON:0000930!7.40e-13!28;UBERON:0002046!2.38e-12!5;UBERON:0004117!2.38e-12!5;UBERON:0007689!2.38e-12!5;UBERON:0007123!2.38e-12!5;UBERON:0003091!2.38e-12!5;UBERON:0000161!2.78e-10!35;UBERON:0008814!3.49e-09!15;UBERON:0004089!1.20e-08!2;UBERON:0000473!4.19e-08!8;UBERON:0001444!1.76e-07!48;UBERON:0007023!3.03e-07!115 | |ontology_enrichment_uberon=UBERON:0001829!4.49e-30!2;UBERON:0001044!1.97e-22!6;UBERON:0003293!1.97e-22!6;UBERON:0003294!1.97e-22!6;UBERON:0010047!1.97e-22!6;UBERON:0000167!1.97e-22!6;UBERON:0000078!5.64e-20!18;UBERON:0000166!3.93e-17!21;UBERON:0001831!5.56e-16!1;UBERON:0001567!5.56e-16!1;UBERON:0008801!5.56e-16!1;UBERON:0001736!6.44e-16!1;UBERON:0006298!6.44e-16!1;UBERON:0002372!3.17e-15!1;UBERON:0001961!3.17e-15!1;UBERON:0001744!3.17e-15!1;UBERON:0001735!3.17e-15!1;UBERON:0003408!1.00e-13!10;UBERON:0000165!7.40e-13!28;UBERON:0000930!7.40e-13!28;UBERON:0002046!2.38e-12!5;UBERON:0004117!2.38e-12!5;UBERON:0007689!2.38e-12!5;UBERON:0007123!2.38e-12!5;UBERON:0003091!2.38e-12!5;UBERON:0000161!2.78e-10!35;UBERON:0008814!3.49e-09!15;UBERON:0004089!1.20e-08!2;UBERON:0000473!4.19e-08!8;UBERON:0001444!1.76e-07!48;UBERON:0007023!3.03e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;4.61e-131;2!UBERON:0001044;1.83e-98;6!UBERON:0003293;1.83e-98;6!UBERON:0003294;1.83e-98;6!UBERON:0010047;1.83e-98;6!UBERON:0003408;1.83e-98;6!UBERON:0000167;1.83e-98;6!UBERON:0001831;1.23e-66;1!UBERON:0001567;1.23e-66;1!UBERON:0001736;2.39e-66;1!UBERON:0001041;4.85e-43;14!UBERON:0004089;3.61e-34;2!UBERON:0000161;4.52e-32;19!UBERON:0000166;4.52e-32;19!UBERON:0000165;3.57e-22;28!UBERON:0002365;1.07e-19;31!UBERON:0002330;1.07e-19;31!UBERON:0004921;1.94e-16;33!UBERON:0007811;5.54e-11;52!UBERON:0000153;3.83e-10;54!UBERON:0000033;4.44e-10;50!UBERON:0001555;3.00e-09;54!UBERON:0001444;3.02e-09;48!UBERON:0002530;7.65e-09;57!UBERON:0002553;7.36e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0001829;4.61e-131;2!UBERON:0001044;1.83e-98;6!UBERON:0003293;1.83e-98;6!UBERON:0003294;1.83e-98;6!UBERON:0010047;1.83e-98;6!UBERON:0003408;1.83e-98;6!UBERON:0000167;1.83e-98;6!UBERON:0001831;1.23e-66;1!UBERON:0001567;1.23e-66;1!UBERON:0001736;2.39e-66;1!UBERON:0001041;4.85e-43;14!UBERON:0004089;3.61e-34;2!UBERON:0000161;4.52e-32;19!UBERON:0000166;4.52e-32;19!UBERON:0000165;3.57e-22;28!UBERON:0002365;1.07e-19;31!UBERON:0002330;1.07e-19;31!UBERON:0004921;1.94e-16;33!UBERON:0007811;5.54e-11;52!UBERON:0000153;3.83e-10;54!UBERON:0000033;4.44e-10;50!UBERON:0001555;3.00e-09;54!UBERON:0001444;3.02e-09;48!UBERON:0002530;7.65e-09;57!UBERON:0002553;7.36e-07;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,4.61e-131,2;UBERON:0001044,1.83e-98,6;UBERON:0003293,1.83e-98,6;UBERON:0003294,1.83e-98,6;UBERON:0010047,1.83e-98,6;UBERON:0000167,1.83e-98,6;UBERON:0001831,1.23e-66,1;UBERON:0001567,1.23e-66,1;UBERON:0008801,1.23e-66,1;UBERON:0001736,2.39e-66,1;UBERON:0006298,2.39e-66,1;UBERON:0003408,1.10e-59,10;UBERON:0004089,3.61e-34,2;UBERON:0000166,7.08e-28,22;UBERON:0000165,1.88e-21,29;UBERON:0000930,1.88e-21,29;UBERON:0002365,3.79e-20,31;UBERON:0002330,3.79e-20,31;UBERON:0000161,1.62e-17,36;UBERON:0001444,3.57e-13,49;UBERON:0000033,1.15e-11,56;UBERON:0002530,3.99e-11,59;UBERON:0002553,8.52e-11,61;UBERON:0000153,1.22e-10,62;UBERON:0007811,1.22e-10,62;UBERON:0001004,4.40e-09,74;UBERON:0001041,7.10e-08,87;UBERON:0003102,4.88e-07,99 | |||
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|short_description=p4@PRR4 | |short_description=p4@PRR4 | ||
}} | }} |
Latest revision as of 07:30, 16 September 2015
Short description: | p4@PRR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRR4_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | 0bp_to_ENST00000543480_5end |
EntrezGene: | PRR4 |
HGNC: | 18020 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 4.61e-131 | 2 |
saliva-secreting gland | 1.83e-98 | 6 |
gland of oral region | 1.83e-98 | 6 |
gland of foregut | 1.83e-98 | 6 |
oral gland | 1.83e-98 | 6 |
oral cavity | 1.83e-98 | 6 |
parotid gland | 1.23e-66 | 1 |
cheek | 1.23e-66 | 1 |
parotid gland primordium | 1.23e-66 | 1 |
submandibular gland | 2.39e-66 | 1 |
submandibular gland primordium | 2.39e-66 | 1 |
gland of gut | 1.10e-59 | 10 |
midface | 3.61e-34 | 2 |
oral opening | 7.08e-28 | 22 |
mouth | 1.88e-21 | 29 |
stomodeum | 1.88e-21 | 29 |
exocrine gland | 3.79e-20 | 31 |
exocrine system | 3.79e-20 | 31 |
orifice | 1.62e-17 | 36 |
subdivision of head | 3.57e-13 | 49 |
head | 1.15e-11 | 56 |
gland | 3.99e-11 | 59 |
anatomical cavity | 8.52e-11 | 61 |
anterior region of body | 1.22e-10 | 62 |
craniocervical region | 1.22e-10 | 62 |
respiratory system | 4.40e-09 | 74 |
foregut | 7.10e-08 | 87 |
surface structure | 4.88e-07 | 99 |