FFCP PHASE1:Hg19::chr10:111768133..111768154,-: Difference between revisions
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|id=chr10:111768133..111768154,-
|short_description=p3@LOC100505933
|description=CAGE_peak_3_at_LOC100505933_5end
|association_with_transcript=0bp_to_NR_038943_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100505933 | |EntrezGene=100505933 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_038943_5end | |||
|cluster_id=chr10:111768133..111768154,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_LOC100505933_5end | |||
|id=chr10:111768133..111768154,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000746;1.83e-14;3!CL:0000737;3.42e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.83e-14,3;CL:0000513,1.83e-14,3;CL:0000737,3.42e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10!CL:0000513;1.83e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!6.36e-07!3;UBERON:0004054!6.36e-07!3;UBERON:0003135!7.39e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22 | |||
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| ||
|short_description=p3@LOC100505933 | |||
}} | }} |
Latest revision as of 07:55, 16 September 2015
Short description: | p3@LOC100505933 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC100505933_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_NR_038943_5end |
EntrezGene: | LOC100505933 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.83e-14 | 3 |
cardiac muscle myoblast | 1.83e-14 | 3 |
striated muscle cell | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |