FFCP PHASE1:Hg19::chr2:241831424..241831455,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:241831424..241831455,-
|short_description=p5@C2orf54
|description=CAGE_peak_5_at_C2orf54_5end
|association_with_transcript=0bp_to_ENST00000307486,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79919 | |EntrezGene=79919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26216 | |HGNC=26216 | ||
|TSSclassifier=strong | |||
|UniProt=Q08AI8 | |UniProt=Q08AI8 | ||
|association_with_transcript=0bp_to_ENST00000307486,ENST00000402775,NM_024861,uc002wac.2,uc002wad.2_5end | |||
|cluster_id=chr2:241831424..241831455,- | |||
|coexpression_cluster_id=C3869 | |||
|description=CAGE_peak_5_at_C2orf54_5end | |||
|id=chr2:241831424..241831455,- | |||
|ontology_enrichment_celltype=CL:0001014!8.31e-09!2;CL:0001016!8.31e-09!2;CL:1000415!2.70e-08!2;CL:0002274!5.93e-07!5;CL:0000457!5.93e-07!5;CL:0002191!5.93e-07!5;CL:0000097!5.93e-07!5;CL:0000831!5.93e-07!5;CL:0002028!5.93e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002553;5.56e-16;1!CL:0000244;4.08e-15;4!CL:0000731;4.08e-15;4!CL:0002537;3.07e-12;5!CL:0001014;1.39e-08;2!CL:0001016;1.39e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,5.56e-16,1;CL:0000244,3.18e-15,4;CL:0000731,3.18e-15,4;CL:0002537,3.54e-12,5;CL:0001014,1.39e-08,2;CL:0001016,1.39e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.15e-15;1!UBERON:0008814;1.29e-08;2!UBERON:0010056;1.29e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;2.56e-15;1!DOID:3149;2.56e-15;1!DOID:3451;2.57e-08;2!DOID:4159;2.57e-08;2!DOID:0060122;2.57e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.38e-15,1;DOID:3149,2.38e-15,1;DOID:3451,2.48e-08,2;DOID:4159,2.48e-08,2;DOID:0060122,2.48e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001042!1.19e-09!10;UBERON:0009145!1.19e-09!10;UBERON:0006562!9.64e-09!11;UBERON:0004119!1.39e-08!169;UBERON:0000925!1.39e-08!169;UBERON:0006595!1.39e-08!169;UBERON:0001007!6.26e-08!155;UBERON:0001555!6.26e-08!155;UBERON:0007026!6.26e-08!155;UBERON:0000365!1.53e-07!5;UBERON:0000161!3.73e-07!35;UBERON:0000077!9.99e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;5.63e-20;3!UBERON:0001033;5.63e-20;3!UBERON:0002372;8.63e-16;1!UBERON:0001961;8.63e-16;1!UBERON:0001744;8.63e-16;1!UBERON:0001042;8.63e-16;1!UBERON:0001735;8.63e-16;1!UBERON:0000365;2.74e-12;5!UBERON:0000002;2.14e-10;6!UBERON:0005910;2.14e-10;6!UBERON:0001560;2.14e-10;6!UBERON:0000305;5.26e-09;7!UBERON:0006562;1.50e-08;2!UBERON:0000341;2.57e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.88e-20,3;UBERON:0001033,4.88e-20,3;UBERON:0010056,4.88e-20,3;UBERON:0002372,8.63e-16,1;UBERON:0001961,8.63e-16,1;UBERON:0001744,8.63e-16,1;UBERON:0001735,8.63e-16,1;UBERON:0001042,1.54e-13,10;UBERON:0009145,1.54e-13,10;UBERON:0000365,2.25e-12,5;UBERON:0006562,2.30e-12,11;UBERON:0005910,1.81e-10,6;UBERON:0000002,2.29e-10,6;UBERON:0001560,2.29e-10,6;UBERON:0000305,5.82e-09,7;UBERON:0000341,2.87e-08,2;UBERON:0004871,5.96e-08,8;UBERON:0001557,2.18e-07,19 | |||
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| ||
|short_description=p5@C2orf54 | |||
}} | }} |
Latest revision as of 09:05, 16 September 2015
Short description: | p5@C2orf54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C2orf54_5end |
Coexpression cluster: | C3869_tongue_epidermoid_esophagus_Urothelial_Corneal_cervical_throat |
Association with transcript: | 0bp_to_ENST00000307486, ENST00000402775, NM_024861, uc002wac.2, uc002wad.2_5end |
EntrezGene: | C2orf54 |
HGNC: | 26216 |
UniProt: | Q08AI8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 5.56e-16 | 1 |
transitional epithelial cell | 3.18e-15 | 4 |
urothelial cell | 3.18e-15 | 4 |
amnion mesenchymal stem cell | 3.54e-12 | 5 |
CD1a-positive Langerhans cell | 1.39e-08 | 2 |
immature CD1a-positive Langerhans cell | 1.39e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
tongue | 4.88e-20 | 3 |
gustatory system | 4.88e-20 | 3 |
future tongue | 4.88e-20 | 3 |
tonsil | 8.63e-16 | 1 |
mucosa-associated lymphoid tissue | 8.63e-16 | 1 |
lymphoid tissue | 8.63e-16 | 1 |
tonsillar ring | 8.63e-16 | 1 |
chordate pharynx | 1.54e-13 | 10 |
pharyngeal region of foregut | 1.54e-13 | 10 |
urothelium | 2.25e-12 | 5 |
pharynx | 2.30e-12 | 11 |
transitional epithelium | 1.81e-10 | 6 |
uterine cervix | 2.29e-10 | 6 |
neck of organ | 2.29e-10 | 6 |
amnion | 5.82e-09 | 7 |
throat | 2.87e-08 | 2 |
somatic layer of lateral plate mesoderm | 5.96e-08 | 8 |
upper respiratory tract | 2.18e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.38e-15 | 1 |
keratoacanthoma | 2.38e-15 | 1 |
skin carcinoma | 2.48e-08 | 2 |
skin cancer | 2.48e-08 | 2 |
integumentary system cancer | 2.48e-08 | 2 |