FFCP PHASE1:Hg19::chr16:30772881..30772912,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9810 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16867 | |||
|TSSclassifier=strong | |||
|UniProt=A8K6K1,O75150 | |||
|association_with_transcript=-20bp_to_NM_001207033,NM_001207034,NM_014771_5end | |||
|cluster_id=chr16:30772881..30772912,+ | |||
|description=CAGE_peak_5_at_RNF40_5end | |||
|id=chr16:30772881..30772912,+ | |||
|ontology_enrichment_celltype=CL:0000133!3.32e-12!59;CL:0002319!3.79e-11!25;CL:0000333!4.71e-09!41;CL:0000221!5.57e-09!71;CL:0000095!7.58e-08!17;CL:0000123!7.58e-08!17;CL:0000075!8.93e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.25e-18;25!CL:0000540;4.95e-11;6!CL:0000404;4.95e-11;6!CL:0000095;2.85e-09;17!CL:0000123;6.88e-09;2!CL:0000242;6.88e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.88e-19,25;CL:0000047,2.02e-12,8;CL:0000540,3.13e-11,6;CL:0000031,3.13e-11,6;CL:0000404,3.13e-11,6;CL:0000133,3.40e-11,59;CL:0000095,2.09e-09,17;CL:0000123,2.09e-09,17;CL:0000785,2.53e-09,2;CL:0000955,2.53e-09,2;CL:0000818,2.53e-09,2;CL:0000954,2.53e-09,2;CL:0000816,2.53e-09,2;CL:0000242,2.98e-09,2;CL:0000221,1.19e-08,72;CL:0000333,2.59e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000031;4.95e-11;6!CL:0000954;2.50e-09;2 | |||
|ontology_enrichment_disease=DOID:14566!1.15e-15!239;DOID:162!4.09e-15!235;DOID:0050686!4.90e-10!137;DOID:1240!8.94e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,1.10808952269109,0.408001382488506,1.25381888591235,1.43117993565528,0.684372125364421,0.251085279189606,0.458480434487708,0.328402357799783,0.629686250509434,0,0,0,0,0.30120591877825,0,0,0,0.587200878669695,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0.526768169550154,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0.383587685530591,0,0,0.144846518960824,0,0.486634870302636,0.567208902984407,0.886917589850256,0.527008714158756,0.0654895377488563,0.364295288292542,0,0,0,0,1.43094374583205,0,1.11437250398869,0.198762407366705,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0.760272105718513,0,0,0.81014194788176,0.0892997282840798,0,0.225222960966644,1.53316637465883,0,0,0,0,0.872188104285069,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,1.06748995729705,0.49333509683432,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0.234321431833797,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0,0,0.505008341862199,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0.211931901159562,0.300091096084402,0,0,0,0.168776332241266,0,0.252433774244115,0,0.161646056818812,0,0,0.339121184620975,0.193260853163297,0,0,0.243947412259191,1.85541675650079,0.929551542956147,1.0366105501537,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0,0.168584690078102,0.241011029883482,0.330881918197182,0.871517776369625,0.237270619111097,0.134831308160164,1.37355025587742,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0,0,0,1.44331342025273,0.463721619900307,0.234817388471643,0.288732895522148,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0.698476837213859,0.763976851116555,0,1.71072446022705,0.822619941626588,0.901029173531752,1.14330573052231,0.112131084345361,0,0.4400297149257,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0.205476322550383,0,0.448340575974109,0,0.215627574859517,0.385029108839245,1.01637849688985,0,2.31986643833309,0.837581326671744,1.27587750330633,0,0,0,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0,0.256278298511402,0.511707249066704,0.321707842287215,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0.546273504020151,0,0.451199612907412,0.15403067420883,0,0,0.422206515571503,1.13733384070897,0,0,0,0.541892875087706,1.00337954770971,0.764628819135115,0,0.223874754722178,0,0,0,0.656029291399411,0.650756789328606,0,0.27470839445503,0.41254749960294,0,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0,0.255679882248303,0.0890320356467374,0,0.192190067365106,0,0,0,0,0.6970372701606,0,0,0,0,0.286249773483982,0,0,0.38126038784765,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0.353437207037059,0.202182481573316,0,0,0.48763373908959,0.974853958525138,1.05650146756755,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.845086807596724,0,0,0,0,0,0.329294892959902,0.379473173765715,1.39973888097993,0.0962221127255121,0.670302275535787,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.534120355637366,0,0.490080431962063,2.22963810150862,0.721346064882224,2.70339004723974,0.478278818186467,0.399158742865633,0.5745161103971,0.211673582723883,0,1.40398589056729,0.912938716132769,0.94007937463814,0,0.169291777801603,0.963528450622197,0.80719882876419,1.27753871307098,0,0.921722292925374,0.671028323677248,0.500547425135725,0.390776190804081,0.278406173895242,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0.222617410045812,0,0.211125408127993,0,0.552567831062295,1.76352923497993,0.818149460017238,0.492339221844278,0,0,0,1.53471711068062,0,0,0,0,0.185536196323703,0,0,0.61221999997337,0,0.1137934482855,0,0,1.03423011972439,0.583209226766509,0.520874984799877,0,0.241192877250816,0,0.110579259931225,0,0.438770794307945,0.10893846351899,0.278847488557207,0,0.113942055847001,0.23056390438806,0.179515288819544,0.217294743844016,0,0.274792780205587,0,1.02193298195737,0,0.664846727600626,0.225595660617181,0.19606253431774,1.1747511088309,0.189753732724185,0,0.210998064528027,0.489698424477443,0,0,0,0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|short_description=p5@RNF40 | |||
}} |
Latest revision as of 09:32, 16 September 2015
Short description: | p5@RNF40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RNF40_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_NM_001207033, NM_001207034, NM_014771_5end |
EntrezGene: | RNF40 |
HGNC: | 16867 |
UniProt: | A8K6K1O75150 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.88e-19 | 25 |
neuronal stem cell | 2.02e-12 | 8 |
neuron | 3.13e-11 | 6 |
neuroblast | 3.13e-11 | 6 |
electrically signaling cell | 3.13e-11 | 6 |
neurectodermal cell | 3.40e-11 | 59 |
neuron associated cell | 2.09e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.09e-09 | 17 |
mature B cell | 2.53e-09 | 2 |
pre-B-II cell | 2.53e-09 | 2 |
transitional stage B cell | 2.53e-09 | 2 |
small pre-B-II cell | 2.53e-09 | 2 |
immature B cell | 2.53e-09 | 2 |
Merkel cell | 2.98e-09 | 2 |
ectodermal cell | 1.19e-08 | 72 |
migratory neural crest cell | 2.59e-07 | 41 |