FFCP PHASE1:Hg19::chr3:159570722..159570733,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:159570722..159570733,+
|short_description=p29@SCHIP1
|description=CAGE_peak_29_at_SCHIP1_5end
|association_with_transcript=0bp_to_ENST00000482804_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29970 | |EntrezGene=29970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |HGNC=15678 | ||
|TSSclassifier=strong | |||
|UniProt=C9JWG6 | |UniProt=C9JWG6 | ||
|association_with_transcript=0bp_to_ENST00000482804_5end | |||
|cluster_id=chr3:159570722..159570733,+ | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_29_at_SCHIP1_5end | |||
|id=chr3:159570722..159570733,+ | |||
|ontology_enrichment_celltype=CL:0002139!9.28e-13!24;CL:0000115!1.07e-08!35;CL:0000071!3.51e-08!18;CL:0002546!3.51e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.39e-07;6!CL:0002618;4.90e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.40e-07,6;CL:0002138,1.40e-07,6;CL:0005022,1.40e-07,6;CL:0002618,6.09e-07,3;CL:0000115,6.66e-07,36 | |||
|ontology_enrichment_development_v019=CL:0005022;1.39e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.51e-08!18;UBERON:0004638!3.51e-08!18;UBERON:0004852!3.51e-08!18;UBERON:0002049!1.08e-07!79;UBERON:0007798!1.08e-07!79;UBERON:0000055!1.96e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;4.20e-11;2!UBERON:0001630;4.20e-11;2!UBERON:0004151;1.34e-07;3!UBERON:0001723;2.89e-07;3!UBERON:0001033;2.89e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,4.02e-11,2;UBERON:0001630,4.02e-11,2;UBERON:0004151,1.44e-07,3;UBERON:0001723,3.08e-07,3;UBERON:0001033,3.08e-07,3;UBERON:0010056,3.08e-07,3 | |||
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| ||
|short_description=p29@SCHIP1 | |||
}} | }} |
Latest revision as of 09:45, 16 September 2015
Short description: | p29@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_SCHIP1_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 0bp_to_ENST00000482804_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | C9JWG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.40e-07 | 6 |
endothelial cell of lymphatic vessel | 1.40e-07 | 6 |
vascular lymphangioblast | 1.40e-07 | 6 |
endothelial cell of umbilical vein | 6.09e-07 | 3 |
endothelial cell | 6.66e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
muscle structure | 4.02e-11 | 2 |
muscle organ | 4.02e-11 | 2 |
cardiac chamber | 1.44e-07 | 3 |
tongue | 3.08e-07 | 3 |
gustatory system | 3.08e-07 | 3 |
future tongue | 3.08e-07 | 3 |