FFCP PHASE1:Hg19::chr9:138394283..138394314,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51116 | |EntrezGene=51116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14495 | |HGNC=14495 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-119bp_to_ENST00000472946_5end | |association_with_transcript=-119bp_to_ENST00000472946_5end | ||
|cluster_id=chr9:138394283..138394314,+ | |||
|coexpression_cluster_id=C137 | |coexpression_cluster_id=C137 | ||
|description=CAGE_peak_9_at_MRPS2_5end | |description=CAGE_peak_9_at_MRPS2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!9.00e-14!3;CL:0000313!9.97e-11!1;CL:0002566!1.61e-10!1;CL:0000312!1.86e-08!5;CL:0000240!3.46e-07!6;CL:0000311!3.46e-07!6;CL:0000079!3.46e-07!6;CL:0000237!3.46e-07!6;CL:0000036!3.46e-07!6;CL:0000357!3.46e-07!6;CL:0000114!3.46e-07!6 | |ontology_enrichment_celltype=CL:0002541!9.00e-14!3;CL:0000313!9.97e-11!1;CL:0002566!1.61e-10!1;CL:0000312!1.86e-08!5;CL:0000240!3.46e-07!6;CL:0000311!3.46e-07!6;CL:0000079!3.46e-07!6;CL:0000237!3.46e-07!6;CL:0000036!3.46e-07!6;CL:0000357!3.46e-07!6;CL:0000114!3.46e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002541;5.96e-34;3 | |ontology_enrichment_celltype_v019=CL:0002541;5.96e-34;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.96e-34,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2152!9.97e-11!1 | |ontology_enrichment_disease=DOID:2152!9.97e-11!1 | ||
|ontology_enrichment_disease_v019=DOID:4556;4.27e-34;3!DOID:3908;4.21e-21;5!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |ontology_enrichment_disease_v019=DOID:4556;4.27e-34;3!DOID:3908;4.21e-21;5!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:4556,4.27e-34,3;DOID:3908,4.21e-21,5;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0000476!9.00e-14!3;UBERON:0000920!9.00e-14!3;UBERON:0003124!6.34e-13!7;UBERON:0006834!3.08e-11!1;UBERON:0001000!3.76e-11!1;UBERON:0005352!3.76e-11!1;UBERON:0004911!9.97e-11!1;UBERON:0003133!4.09e-09!48;UBERON:0003134!6.33e-09!37;UBERON:0000474!6.33e-09!37;UBERON:0003100!5.21e-08!41;UBERON:0005156!2.81e-07!59;UBERON:0000990!2.81e-07!59;UBERON:0000992!3.35e-07!13 | |ontology_enrichment_uberon=UBERON:0000476!9.00e-14!3;UBERON:0000920!9.00e-14!3;UBERON:0003124!6.34e-13!7;UBERON:0006834!3.08e-11!1;UBERON:0001000!3.76e-11!1;UBERON:0005352!3.76e-11!1;UBERON:0004911!9.97e-11!1;UBERON:0003133!4.09e-09!48;UBERON:0003134!6.33e-09!37;UBERON:0000474!6.33e-09!37;UBERON:0003100!5.21e-08!41;UBERON:0005156!2.81e-07!59;UBERON:0000990!2.81e-07!59;UBERON:0000992!3.35e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.96e-34;3!UBERON:0000920;5.96e-34;3!UBERON:0005631;3.02e-11;10!UBERON:0000158;3.02e-11;10 | |ontology_enrichment_uberon_v019=UBERON:0003124;5.96e-34;3!UBERON:0000920;5.96e-34;3!UBERON:0005631;3.02e-11;10!UBERON:0000158;3.02e-11;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.96e-34,3;UBERON:0003124,1.91e-15,7;UBERON:0005631,2.00e-08,14;UBERON:0000158,2.00e-08,14 | |||
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|short_description=p9@MRPS2 | |short_description=p9@MRPS2 | ||
}} | }} |
Latest revision as of 10:28, 16 September 2015
Short description: | p9@MRPS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MRPS2_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | -119bp_to_ENST00000472946_5end |
EntrezGene: | MRPS2 |
HGNC: | 14495 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.96e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.96e-34 | 3 |
chorion | 1.91e-15 | 7 |
extraembryonic membrane | 2.00e-08 | 14 |
membranous layer | 2.00e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 4.27e-34 | 3 |
non-small cell lung carcinoma | 4.21e-21 | 5 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |