FFCP PHASE1:Hg19::chr7:134345481..134345492,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=669 | |EntrezGene=669 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1093 | |HGNC=1093 | ||
|TSSclassifier=strong | |||
|UniProt=C9JH23 | |UniProt=C9JH23 | ||
|association_with_transcript=308bp_to_ENST00000443095_5end | |association_with_transcript=308bp_to_ENST00000443095_5end | ||
|cluster_id=chr7:134345481..134345492,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_4_at_BPGM_5end | |description=CAGE_peak_4_at_BPGM_5end | ||
|id=chr7:134345481..134345492,+ | |id=chr7:134345481..134345492,+ | ||
|ontology_enrichment_celltype=CL:0000764!2.71e-13!2;CL:0000765!2.71e-13!2;CL:0000050!2.71e-13!2;CL:0000038!2.71e-13!2;CL:0000558!2.71e-13!2;CL:0000547!2.71e-13!2;CL:0000549!2.71e-13!2;CL:0000550!2.71e-13!2;CL:0000552!2.71e-13!2;CL:0002568!5.19e-07!1 | |ontology_enrichment_celltype=CL:0000764!2.71e-13!2;CL:0000765!2.71e-13!2;CL:0000050!2.71e-13!2;CL:0000038!2.71e-13!2;CL:0000558!2.71e-13!2;CL:0000547!2.71e-13!2;CL:0000549!2.71e-13!2;CL:0000550!2.71e-13!2;CL:0000552!2.71e-13!2;CL:0002568!5.19e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.92e-27;2!CL:0000558;2.92e-27;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.13e-27,2;CL:0000765,3.13e-27,2;CL:0000050,3.13e-27,2;CL:0000038,3.13e-27,2;CL:0000558,3.13e-27,2;CL:0000547,3.13e-27,2;CL:0000549,3.13e-27,2;CL:0000550,3.13e-27,2;CL:0000552,3.13e-27,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.98e-39!15;UBERON:0000179!1.98e-39!15;UBERON:0000463!1.98e-39!15;UBERON:0000341!1.37e-12!2;UBERON:0007023!4.39e-10!115;UBERON:0002390!1.08e-08!102;UBERON:0003061!1.08e-08!102;UBERON:0002193!1.12e-07!112;UBERON:0007029!2.52e-07!1;UBERON:0002426!2.67e-07!1;UBERON:0003831!2.67e-07!1;UBERON:0003898!2.67e-07!1;UBERON:0004830!2.67e-07!1;UBERON:0001774!2.67e-07!1;UBERON:0003830!2.67e-07!1;UBERON:0005175!2.67e-07!1;UBERON:0003897!2.67e-07!1;UBERON:0001103!2.67e-07!1;UBERON:0010084!2.67e-07!1;UBERON:0002363!7.40e-07!1;UBERON:0007647!7.40e-07!1;UBERON:0010115!7.40e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.39e-71;15!UBERON:0000179;4.39e-71;15!UBERON:0000463;4.39e-71;15!UBERON:0002390;1.18e-37;32!UBERON:0002193;6.97e-19;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.22e-71,15;UBERON:0000179,4.22e-71,15;UBERON:0000463,4.22e-71,15;UBERON:0007023,6.13e-13,114;UBERON:0002390,2.12e-12,98;UBERON:0003061,2.12e-12,98;UBERON:0002193,3.71e-11,108;UBERON:0004535,5.10e-09,109;UBERON:0001009,9.47e-09,112 | |||
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|short_description=p4@BPGM | |short_description=p4@BPGM | ||
}} | }} |
Latest revision as of 11:29, 16 September 2015
Short description: | p4@BPGM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BPGM_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 308bp_to_ENST00000443095_5end |
EntrezGene: | BPGM |
HGNC: | 1093 |
UniProt: | C9JH23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.13e-27 | 2 |
erythroblast | 3.13e-27 | 2 |
megakaryocyte-erythroid progenitor cell | 3.13e-27 | 2 |
erythroid progenitor cell | 3.13e-27 | 2 |
reticulocyte | 3.13e-27 | 2 |
proerythroblast | 3.13e-27 | 2 |
basophilic erythroblast | 3.13e-27 | 2 |
polychromatophilic erythroblast | 3.13e-27 | 2 |
orthochromatic erythroblast | 3.13e-27 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.22e-71 | 15 |
haemolymphatic fluid | 4.22e-71 | 15 |
organism substance | 4.22e-71 | 15 |
adult organism | 6.13e-13 | 114 |
hematopoietic system | 2.12e-12 | 98 |
blood island | 2.12e-12 | 98 |
hemolymphoid system | 3.71e-11 | 108 |
cardiovascular system | 5.10e-09 | 109 |
circulatory system | 9.47e-09 | 112 |