FFCP PHASE1:Hg19::chr7:134430212..134430237,+: Difference between revisions
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|id=chr7:134430212..134430237,+
|short_description=p28@CALD1
|description=CAGE_peak_28_at_CALD1_5end
|association_with_transcript=0bp_to_ENST00000436461_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier=strong | |||
|UniProt=C9J813 | |UniProt=C9J813 | ||
|association_with_transcript=0bp_to_ENST00000436461_5end | |||
|cluster_id=chr7:134430212..134430237,+ | |||
|coexpression_cluster_id=C2878 | |||
|description=CAGE_peak_28_at_CALD1_5end | |||
|id=chr7:134430212..134430237,+ | |||
|ontology_enrichment_celltype=CL:0002334!3.12e-12!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;8.07e-14;12!CL:0002579;1.36e-11;3!CL:0002580;1.38e-11;3!CL:0002615;2.12e-11;3!CL:0000136;2.78e-09;13!CL:0002617;3.99e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,8.13e-14,12;CL:0002579,1.32e-11,3;CL:0002580,1.41e-11,3;CL:0002615,2.13e-11,3;CL:0002617,4.22e-08,2;CL:0000136,6.23e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0004872;4.46e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.35e-36!115;UBERON:0003688!3.21e-11!6;UBERON:0002358!3.21e-11!6;UBERON:0003684!3.21e-11!6;UBERON:0001178!3.21e-11!6;UBERON:0004457!7.64e-11!12;UBERON:0000042!7.64e-11!12;UBERON:0004923!8.20e-08!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.95e-21;6!UBERON:0002358;2.95e-21;6!UBERON:0003684;2.95e-21;6!UBERON:0001178;2.95e-21;6!UBERON:0004457;6.60e-14;9!UBERON:0000042;6.60e-14;9!UBERON:0000310;8.71e-09;10!UBERON:0005406;4.98e-08;2!UBERON:0001443;6.02e-08;11!UBERON:0002360;1.66e-07;2!UBERON:0000094;1.66e-07;2!UBERON:0010743;1.66e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.89e-21,6;UBERON:0002358,2.89e-21,6;UBERON:0003684,2.89e-21,6;UBERON:0001178,2.89e-21,6;UBERON:0004457,5.86e-18,12;UBERON:0000042,5.86e-18,12;UBERON:0007023,1.40e-13,114;UBERON:0000310,9.04e-09,10;UBERON:0002323,2.80e-08,46;UBERON:0004923,4.10e-08,66;UBERON:0005406,5.00e-08,2;UBERON:0003886,6.05e-08,54;UBERON:0001443,6.22e-08,11;UBERON:0002553,8.26e-08,61;UBERON:0002360,9.82e-08,2;UBERON:0000094,9.82e-08,2;UBERON:0010743,9.82e-08,2;UBERON:0004458,1.30e-07,49 | |||
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| ||
|short_description=p28@CALD1 | |||
}} | }} |
Latest revision as of 11:37, 16 September 2015
Short description: | p28@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_CALD1_5end |
Coexpression cluster: | C2878_Preadipocyte_spleen_Adipocyte_ovary_chorionic_Mesenchymal_dura |
Association with transcript: | 0bp_to_ENST00000436461_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | C9J813 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 8.13e-14 | 12 |
omentum preadipocyte | 1.32e-11 | 3 |
preadipocyte of the breast | 1.41e-11 | 3 |
adipocyte of omentum tissue | 2.13e-11 | 3 |
adipocyte of breast | 4.22e-08 | 2 |
fat cell | 6.23e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.89e-21 | 6 |
peritoneum | 2.89e-21 | 6 |
abdominal cavity | 2.89e-21 | 6 |
visceral peritoneum | 2.89e-21 | 6 |
cavity lining | 5.86e-18 | 12 |
serous membrane | 5.86e-18 | 12 |
adult organism | 1.40e-13 | 114 |
breast | 9.04e-09 | 10 |
body cavity | 2.80e-08 | 46 |
organ component layer | 4.10e-08 | 66 |
perirenal fat | 5.00e-08 | 2 |
body cavity precursor | 6.05e-08 | 54 |
chest | 6.22e-08 | 11 |
anatomical cavity | 8.26e-08 | 61 |
meninx | 9.82e-08 | 2 |
membrane organ | 9.82e-08 | 2 |
meningeal cluster | 9.82e-08 | 2 |
body cavity or lining | 1.30e-07 | 49 |