FFCP PHASE1:Hg19::chr19:1753535..1753546,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:1753535..1753546,+
|short_description=p3@ONECUT3
|description=CAGE_peak_3_at_ONECUT3_5end
|association_with_transcript=-115bp_to_NM_001080488,uc010xgr.1_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=390874 | |EntrezGene=390874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13399 | |HGNC=13399 | ||
|TSSclassifier=strong | |||
|UniProt=O60422 | |UniProt=O60422 | ||
|association_with_transcript=-115bp_to_NM_001080488,uc010xgr.1_5end | |||
|cluster_id=chr19:1753535..1753546,+ | |||
|coexpression_cluster_id=C3764 | |||
|description=CAGE_peak_3_at_ONECUT3_5end | |||
|id=chr19:1753535..1753546,+ | |||
|ontology_enrichment_celltype=CL:0002178!6.75e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.01e-38;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.01e-38,3;CL:0002076,9.05e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.73e-29;1 | |||
|ontology_enrichment_disease=DOID:299!2.29e-15!25;DOID:3493!1.95e-14!2;DOID:305!6.37e-09!106;DOID:0050687!4.04e-08!143;DOID:3111!1.01e-07!1;DOID:3603!1.01e-07!1;DOID:162!1.66e-07!235;DOID:14566!2.89e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.31e-57;2!DOID:299;1.11e-18;25!DOID:3119;3.88e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.51e-57,2;DOID:299,1.14e-18,25;DOID:3119,3.88e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000945!5.41e-08!8;UBERON:0010039!5.41e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.02e-23;5!UBERON:0010039;1.02e-23;5!UBERON:0002110;1.04e-10;3!UBERON:0001041;3.88e-09;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,3.06e-15,8;UBERON:0010039,3.06e-15,8;UBERON:0002110,9.90e-11,3;UBERON:0006242,9.90e-11,3 | |||
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|short_description=p3@ONECUT3 | |||
}} | }} |
Latest revision as of 12:13, 16 September 2015
Short description: | p3@ONECUT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ONECUT3_5end |
Coexpression cluster: | C3764_rhabdomyosarcoma_signet_gastric_gall_giant_endometrioid_adenocarcinoma |
Association with transcript: | -115bp_to_NM_001080488, uc010xgr.1_5end |
EntrezGene: | ONECUT3 |
HGNC: | 13399 |
UniProt: | O60422 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.01e-38 | 3 |
endo-epithelial cell | 9.05e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
stomach | 3.06e-15 | 8 |
food storage organ | 3.06e-15 | 8 |
gallbladder | 9.90e-11 | 3 |
gall bladder primordium | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.51e-57 | 2 |
adenocarcinoma | 1.14e-18 | 25 |
gastrointestinal system cancer | 3.88e-09 | 14 |