FFCP PHASE1:Hg19::chr20:44441304..44441319,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11065 | |EntrezGene=11065 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15937 | |HGNC=15937 | ||
|TSSclassifier=strong | |||
|UniProt=A6NP33 | |UniProt=A6NP33 | ||
|association_with_transcript=0bp_to_ENST00000352551_5end | |association_with_transcript=0bp_to_ENST00000352551_5end | ||
|cluster_id=chr20:44441304..44441319,+ | |||
|coexpression_cluster_id=C747 | |||
|description=CAGE_peak_2_at_UBE2C_5end | |description=CAGE_peak_2_at_UBE2C_5end | ||
|id=chr20:44441304..44441319,+ | |id=chr20:44441304..44441319,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.82e-23!254;CL:0000548!2.26e-17!679;CL:0000004!2.26e-17!679;CL:0000255!2.26e-17!679;CL:0000012!2.59e-17!682;CL:0002321!2.40e-16!248;CL:0000220!6.02e-16!246;CL:0000055!1.17e-13!180;CL:0000003!4.52e-10!722;CL:0000333!5.27e-10!41;CL:0000133!7.99e-10!59;CL:0000221!9.43e-09!71;CL:0000076!4.71e-08!62;CL:0002319!7.11e-08!25;CL:0000222!3.99e-07!119 | |ontology_enrichment_celltype=CL:0000066!8.82e-23!254;CL:0000548!2.26e-17!679;CL:0000004!2.26e-17!679;CL:0000255!2.26e-17!679;CL:0000012!2.59e-17!682;CL:0002321!2.40e-16!248;CL:0000220!6.02e-16!246;CL:0000055!1.17e-13!180;CL:0000003!4.52e-10!722;CL:0000333!5.27e-10!41;CL:0000133!7.99e-10!59;CL:0000221!9.43e-09!71;CL:0000076!4.71e-08!62;CL:0002319!7.11e-08!25;CL:0000222!3.99e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002319;5.46e-08;25!CL:0000095;8.80e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.52e-23,253;CL:0002321,3.33e-16,250;CL:0000333,3.38e-10,41;CL:0000133,5.99e-10,59;CL:0000221,2.20e-08,72;CL:0002319,5.80e-08,25;CL:0000076,9.26e-08,63;CL:0000222,4.89e-07,121;CL:0000095,8.92e-07,17;CL:0000123,8.92e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.37e-31!235;DOID:14566!9.95e-31!239;DOID:0050687!5.30e-21!143;DOID:305!3.61e-15!106;DOID:0050686!1.79e-12!137 | |ontology_enrichment_disease=DOID:162!5.37e-31!235;DOID:14566!9.95e-31!239;DOID:0050687!5.30e-21!143;DOID:305!3.61e-15!106;DOID:0050686!1.79e-12!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.33e-32,235;DOID:14566,8.24e-32,239;DOID:0050687,2.43e-21,143;DOID:305,2.01e-15,106;DOID:0050686,4.39e-13,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@UBE2C | |short_description=p2@UBE2C | ||
}} | }} |
Latest revision as of 12:30, 16 September 2015
Short description: | p2@UBE2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UBE2C_5end |
Coexpression cluster: | C747_Mesenchymal_alveolar_Trabecular_Alveolar_carcinoid_Renal_chronic |
Association with transcript: | 0bp_to_ENST00000352551_5end |
EntrezGene: | UBE2C |
HGNC: | 15937 |
UniProt: | A6NP33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.52e-23 | 253 |
embryonic cell | 3.33e-16 | 250 |
migratory neural crest cell | 3.38e-10 | 41 |
neurectodermal cell | 5.99e-10 | 59 |
ectodermal cell | 2.20e-08 | 72 |
neural cell | 5.80e-08 | 25 |
squamous epithelial cell | 9.26e-08 | 63 |
mesodermal cell | 4.89e-07 | 121 |
neuron associated cell | 8.92e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 8.92e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.33e-32 | 235 |
disease of cellular proliferation | 8.24e-32 | 239 |
cell type cancer | 2.43e-21 | 143 |
carcinoma | 2.01e-15 | 106 |
organ system cancer | 4.39e-13 | 137 |