FFCP PHASE1:Hg19::chr10:118032697..118032725,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:118032697..118032725,-
|short_description=p3@GFRA1
|description=CAGE_peak_3_at_GFRA1_5end
|association_with_transcript=70bp_to_NM_001145453_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2674 | |EntrezGene=2674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4243 | |HGNC=4243 | ||
|TSSclassifier=strong | |||
|UniProt=P56159 | |UniProt=P56159 | ||
|association_with_transcript=70bp_to_NM_001145453_5end | |||
|cluster_id=chr10:118032697..118032725,- | |||
|coexpression_cluster_id=C1565 | |||
|description=CAGE_peak_3_at_GFRA1_5end | |||
|id=chr10:118032697..118032725,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,8.75e-07,7;CL:0000126,8.75e-07,7;CL:0000127,8.75e-07,7;CL:0002453,8.75e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.24e-14!365;UBERON:0007023!4.41e-13!115;UBERON:0003075!7.91e-13!86;UBERON:0007284!7.91e-13!86;UBERON:0003056!4.86e-12!61;UBERON:0002346!2.17e-11!90;UBERON:0000153!1.77e-10!129;UBERON:0007811!1.77e-10!129;UBERON:0005743!4.57e-10!86;UBERON:0000033!5.60e-10!123;UBERON:0000481!2.66e-09!347;UBERON:0001017!5.53e-09!82;UBERON:0000468!7.23e-09!659;UBERON:0000073!9.49e-09!94;UBERON:0001016!9.49e-09!94;UBERON:0000955!1.01e-08!69;UBERON:0006238!1.01e-08!69;UBERON:0001049!1.91e-08!57;UBERON:0005068!1.91e-08!57;UBERON:0006241!1.91e-08!57;UBERON:0007135!1.91e-08!57;UBERON:0007625!4.94e-08!11;UBERON:0004121!7.42e-08!169;UBERON:0002020!1.06e-07!34;UBERON:0003528!1.06e-07!34;UBERON:0001893!1.06e-07!34;UBERON:0000119!1.21e-07!312;UBERON:0000483!1.23e-07!309;UBERON:0000020!1.33e-07!23;UBERON:0001456!1.42e-07!21;UBERON:0002616!1.43e-07!59;UBERON:0002791!1.69e-07!33;UBERON:0001869!2.53e-07!32;UBERON:0000489!2.93e-07!32;UBERON:0000970!3.33e-07!20;UBERON:0000924!3.63e-07!173;UBERON:0006601!3.63e-07!173;UBERON:0003080!5.10e-07!42;UBERON:0001032!5.18e-07!24;UBERON:0004456!5.18e-07!24;UBERON:0000477!7.92e-07!286;UBERON:0000064!9.40e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;1.51e-08;29!UBERON:0007625;9.40e-08;11!UBERON:0002113;1.48e-07;24!UBERON:0011143;1.48e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.30e-08,31;UBERON:0007625,7.64e-08,11;UBERON:0002113,1.26e-07,26;UBERON:0003918,1.26e-07,26;UBERON:0011143,1.26e-07,26;UBERON:0005095,1.26e-07,26;UBERON:0007687,1.26e-07,26;UBERON:0005172,4.00e-07,54;UBERON:0005173,4.00e-07,54 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0,0,2.53299878168311,1.89515962028049,2.08948502559871,0.982935746006035,0,0,0,0,0.662794751455832,0,0,0,0,0.984968464614303,1.83600622119828,2.19418305034661,2.57612388417951,1.77936752594749,4.5195350254129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,2.89151321907653,0.50133791063589,1.01392563272577,0,0,3.40325341790644,2.88248216701333,2.98638271356629,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,5.35552980423472,2.41697590265488,0.760272105718513,0.976248230192678,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,2.24271040056923,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0.421352420106746,0,0,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0.438977620880838,0.612975591598039,0,0.226864366320042,0.179389635688862,0.85422955527427,1.05965950579781,0,0.309157587715317,2.31876486041066,3.7223371266318,0,0,0.504867548488229,1.28869858099219,1.2931684545505,2.13005755509969,1.61203357164224,0.847802961552438,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,1.14027160516907,0,0,0,1.28648187638577,1.38134921352481,2.3218396401599,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,10.1404027857465,10.8110993834539,10.6342183202653,0,0,6.51957679134397,0,0,0,0,1.95484983186195,0,7.21656710126366,3.4779121492523,0.70445216541493,5.05282567163758,11.1116523018387,5.70762456703795,97.9853453469501,90.9995331820565,0,0,0,0,0,0,0,0,0,0.985326475791887,1.58487181223807,0.207328115540772,0.288239906833923,0.25248486685276,0.190493682876507,1.90994212779139,1.17217447210047,0,0.308482478109971,0,0,0.112131084345361,0,0.07333828582095,0.775630294546667,3.57656445851882,0,0.531876233169741,2.08014873822732,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,2.39624855491583,4.59447743336456,0,0.723906533337896,0.205476322550383,1.43248770591916,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,0,0.271265023699736,0.831883446123229,2.3195768543631,2.20783381047509,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0,3.78887678943202,0,1.96686622439136,1.80479845162965,0.539107359730903,3.13739907670742,0,0.633309773357254,2.27466768141793,0.340187410553031,1.51141141271498,7.71136263451447,3.25135725052623,1.50506932156456,0.509752546090077,0,5.1491193586101,0,0,3.07740150139667,0.656029291399411,0.650756789328606,6.90374778039739,0,0,0,0,4.82051789532479,0,0,0,0.551346289938122,0.429680979473094,0.725083469571143,0.426133137080504,1.4245125703478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949138274156178,1.5250415513906,0.255897791311334,0,0,0,3.41757669408298,1.92175920815238,1.7671860351853,0,0,0,17.0671808681357,0,0,0.818999468447914,1.1312434556297,0,0,0,0,0,0,0,0.6196469961995,0,0.286822704408103,0.196498082026242,0.35667105148125,0,4.43326034125095,1.64647446479951,0.379473173765715,0.349934720244983,0,0,0,6.21349085126742,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0,0.28853842595289,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95572084034114,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.597743964753209,0.552567831062295,0,5.82931490262282,0,2.79935628895627,0,0,0,1.38100767891707,0,10.0023291130173,0.969332746095218,0.371072392647405,0,31.251331330228,0,2.89999830173917,0,0,0,0,0,1.38899995946634,0.885741385813839,0.964771509003264,0,0,0,0.219385397153973,0,0,0.923403102045565,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,1.26598838716816,0.326465616318295,0,0,0,0.884575645033392,2.4441205797345,3.55825354416746,4.94255755786011,4.28129992972367,0.337005664903385,2.40773294189637,0,0,0,0,0.789168805698781,0,0,0.63186579628488,0.450970258243478,2.07376382794494,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,1.16386819786103,0,1.80784592624426,0,0,0.379864775735272,0,0,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0.67952103036807,0.418411385249333,2.44795722327172,0,1.80126086612937,0.684526894459965,0,0.429765441419957,0,2.51354161145029,1.60412296808179,0,0,0.429226048136571,0.223171457441873,2.62015542698232,0,0,0,0,0,2.75596948241297,0,1.59045937961861,0.681017030557878,0,0.412618309791701,0.83088067605837,0,0,0.485996453264197,0,1.10327990218877,5.14054963722981,0,1.07572403599707,0,1.42939065274673,0.662091970365432,0,0.542999601753713,0,0,4.7892076624995,0,2.3854323049959,0,9.23279072171919,2.65013777824443,0.775697738169303,0.13223260174269,0,0,0.961086713109252,0.628817220398664,0.414239055347196,1.48849806543585,0,0,0,1.08803560673895,0.5013797880454,0.919036730290385,0.327872630709804,0,1.77213635993397,0.732157589411779,0.3755727921195,0,0.110929051536852,0.683060432355218,0.138348634936231,0,0,0,0,0,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| ||
|short_description=p3@GFRA1 | |||
}} | }} |
Latest revision as of 13:52, 16 September 2015
Short description: | p3@GFRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GFRA1_5end |
Coexpression cluster: | C1565_MCF7_normal_mesothelioma_Smooth_breast_thyroid_bone |
Association with transcript: | 70bp_to_NM_001145453_5end |
EntrezGene: | GFRA1 |
HGNC: | 4243 |
UniProt: | P56159 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 8.75e-07 | 7 |
macroglial cell | 8.75e-07 | 7 |
astrocyte | 8.75e-07 | 7 |
oligodendrocyte precursor cell | 8.75e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 1.30e-08 | 31 |
pigment epithelium of eye | 7.64e-08 | 11 |
kidney | 1.26e-07 | 26 |
kidney mesenchyme | 1.26e-07 | 26 |
upper urinary tract | 1.26e-07 | 26 |
kidney rudiment | 1.26e-07 | 26 |
kidney field | 1.26e-07 | 26 |
abdomen element | 4.00e-07 | 54 |
abdominal segment element | 4.00e-07 | 54 |