FFCP PHASE1:Hg19::chr12:114843587..114843600,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6910 | |EntrezGene=6910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11604 | |HGNC=11604 | ||
|TSSclassifier=strong | |||
|UniProt=Q99593 | |UniProt=Q99593 | ||
|association_with_transcript=288bp_to_ENST00000405440,NM_181486,uc001tvo.2_5end | |association_with_transcript=288bp_to_ENST00000405440,NM_181486,uc001tvo.2_5end | ||
|cluster_id=chr12:114843587..114843600,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_11_at_TBX5_5end | |description=CAGE_peak_11_at_TBX5_5end | ||
|id=chr12:114843587..114843600,- | |id=chr12:114843587..114843600,- | ||
|ontology_enrichment_celltype=CL:0000057!1.08e-14!75;CL:0002620!1.16e-13!23;CL:0002334!2.71e-12!12;CL:0002580!1.57e-08!3;CL:0002582!4.04e-08!3;CL:0000055!8.55e-07!180 | |ontology_enrichment_celltype=CL:0000057!1.08e-14!75;CL:0002620!1.16e-13!23;CL:0002334!2.71e-12!12;CL:0002580!1.57e-08!3;CL:0002582!4.04e-08!3;CL:0000055!8.55e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000123;2.74e-12;2!CL:0000242;2.74e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.90e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.67e-23;1!UBERON:0005062;6.87e-07;4!UBERON:0007284;6.87e-07;4 | |||
|ontology_enrichment_disease=DOID:114!4.76e-07!2 | |ontology_enrichment_disease=DOID:114!4.76e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:114;5.59e-45;2!DOID:178;3.67e-23;1!DOID:326;3.67e-23;1!DOID:3978;3.67e-23;1!DOID:3394;3.67e-23;1!DOID:5844;3.67e-23;1!DOID:1287;4.35e-23;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.00e-45,2;DOID:178,3.28e-23,1;DOID:326,3.28e-23,1;DOID:3978,3.28e-23,1;DOID:3394,3.28e-23,1;DOID:5844,3.28e-23,1;DOID:1287,4.11e-23,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!9.84e-17!27;UBERON:0000948!2.75e-11!24;UBERON:0005498!2.75e-11!24;UBERON:0004140!2.75e-11!24;UBERON:0009881!2.75e-11!24;UBERON:0004141!2.75e-11!24;UBERON:0003084!2.75e-11!24;UBERON:0007005!2.75e-11!24;UBERON:0004139!2.75e-11!24;UBERON:0004291!2.75e-11!24;UBERON:0002199!7.49e-11!45;UBERON:0002416!7.49e-11!45;UBERON:0002097!1.47e-09!40;UBERON:0003103!5.46e-07!69 | |ontology_enrichment_uberon=UBERON:0007100!9.84e-17!27;UBERON:0000948!2.75e-11!24;UBERON:0005498!2.75e-11!24;UBERON:0004140!2.75e-11!24;UBERON:0009881!2.75e-11!24;UBERON:0004141!2.75e-11!24;UBERON:0003084!2.75e-11!24;UBERON:0007005!2.75e-11!24;UBERON:0004139!2.75e-11!24;UBERON:0004291!2.75e-11!24;UBERON:0002199!7.49e-11!45;UBERON:0002416!7.49e-11!45;UBERON:0002097!1.47e-09!40;UBERON:0003103!5.46e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002146;1.33e-23;1!UBERON:0005623;1.33e-23;1!UBERON:0007100;2.72e-22;25!UBERON:0003978;8.96e-09;3!UBERON:0000946;8.96e-09;3!UBERON:0002346;8.85e-07;4!UBERON:0000923;8.85e-07;4!UBERON:0010316;8.85e-07;4!UBERON:0005291;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,1.34e-23,1;UBERON:0005623,1.34e-23,1;UBERON:0007100,1.07e-20,27;UBERON:0003978,8.96e-09,3;UBERON:0009751,8.96e-09,3;UBERON:0000946,8.96e-09,3;UBERON:0002523,8.96e-09,3;UBERON:0005983,8.96e-09,3;UBERON:0002165,8.96e-09,3;UBERON:0002062,8.96e-09,3;UBERON:0007280,8.96e-09,3;UBERON:0003103,2.47e-08,68 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0.213557388818567,0,0.900273288253207,0.309157587715317,0.257640540045629,0.930584281657949,0.675105328965065,0.584622030967192,0.252433774244115,0.0920498986422993,0,1.06502877754984,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0,0,0,0,0.308419387605311,0.177561725313127,0.246381468041427,0.519254429183621,0.116210378459959,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.558564802544508,3.89572720819862,0,1.19807400299395,5.57993862577542,2.90122894674434,1.47803639470798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,1.1593682288866,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,1.54400723580486,0.877136198314828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,1.05522746615772,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.596852325484105,0.356760272332706,0,0,0.603851374266694,0,0,0,0.490296643507811,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0.213557388818567,0,0.900273288253207,0.309157587715317,0.257640540045629,0.930584281657949,0.675105328965065,0.584622030967192,0.252433774244115,0.0920498986422993,0,1.06502877754984,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0,0,0,0,0.308419387605311,0.177561725313127,0.246381468041427,0.519254429183621,0.116210378459959,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.558564802544508,3.89572720819862,0,1.19807400299395,5.57993862577542,2.90122894674434,1.47803639470798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,1.1593682288866,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,1.54400723580486,0.877136198314828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,1.05522746615772,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.596852325484105,0.356760272332706,0,0,0.603851374266694,0,0,0,0.490296643507811,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@TBX5 | |short_description=p11@TBX5 | ||
}} | }} |
Latest revision as of 14:09, 16 September 2015
Short description: | p11@TBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TBX5_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 288bp_to_ENST00000405440, NM_181486, uc001tvo.2_5end |
EntrezGene: | TBX5 |
HGNC: | 11604 |
UniProt: | Q99593 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.90e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 1.34e-23 | 1 |
semi-lunar valve | 1.34e-23 | 1 |
primary circulatory organ | 1.07e-20 | 27 |
valve | 8.96e-09 | 3 |
cardiac mesenchyme | 8.96e-09 | 3 |
cardial valve | 8.96e-09 | 3 |
tunica intima | 8.96e-09 | 3 |
heart layer | 8.96e-09 | 3 |
endocardium | 8.96e-09 | 3 |
endocardial cushion | 8.96e-09 | 3 |
presumptive endocardium | 8.96e-09 | 3 |
compound organ | 2.47e-08 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.00e-45 | 2 |
vascular disease | 3.28e-23 | 1 |
ischemia | 3.28e-23 | 1 |
extrinsic cardiomyopathy | 3.28e-23 | 1 |
myocardial ischemia | 3.28e-23 | 1 |
myocardial infarction | 3.28e-23 | 1 |
cardiovascular system disease | 4.11e-23 | 4 |