FFCP PHASE1:Hg19::chr9:139839598..139839609,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=733 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1354 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SQ08,P07360 | |||
|association_with_transcript=-88bp_to_ENST00000371634,NM_000606,uc004cka.2_5end | |||
|cluster_id=chr9:139839598..139839609,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_C8G_5end | |||
|id=chr9:139839598..139839609,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.36e-23!12;CL:0000417!3.36e-23!12;CL:0000668!3.36e-23!12;CL:0000414!3.36e-23!12;CL:0000412!3.36e-23!12;CL:0000182!3.36e-23!12;CL:0002127!4.81e-12!1;CL:0000914!4.81e-12!1;CL:0000911!4.81e-12!1;CL:0000814!4.81e-12!1;CL:0002042!4.81e-12!1;CL:0002039!4.81e-12!1;CL:0002040!4.81e-12!1;CL:0002041!4.81e-12!1 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.93e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.00e-19,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:6193!2.20e-12!1;DOID:3493!7.61e-07!2;DOID:3350!8.06e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.20e-21!19;UBERON:0006925!7.20e-21!19;UBERON:0008836!7.20e-21!19;UBERON:0005057!2.47e-20!26;UBERON:0008835!5.54e-18!22;UBERON:0003894!5.54e-18!22;UBERON:0009854!3.46e-17!23;UBERON:0007499!8.71e-16!25;UBERON:0009497!8.71e-16!25;UBERON:0000015!8.71e-16!25;UBERON:0002423!8.71e-16!25;UBERON:0006235!8.71e-16!25;UBERON:0004161!8.71e-16!25;UBERON:0009856!3.63e-15!26;UBERON:0002368!5.91e-15!35;UBERON:0002365!1.16e-12!31;UBERON:0002330!1.16e-12!31;UBERON:0000949!1.71e-11!45;UBERON:0003929!1.81e-09!54;UBERON:0002530!1.31e-08!59;UBERON:0005911!8.84e-08!82;UBERON:0004921!3.26e-07!129;UBERON:0004185!3.26e-07!129;UBERON:0005172!5.83e-07!55;UBERON:0005173!5.83e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.88e-21;19!UBERON:0006925;1.88e-21;19!UBERON:0002423;1.95e-16;25!UBERON:0002365;8.84e-14;31!UBERON:0002330;8.84e-14;31!UBERON:0002368;3.79e-11;33!UBERON:0000949;2.15e-09;43!UBERON:0005172;5.46e-07;52!UBERON:0005173;5.46e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.88e-21,19;UBERON:0006925,1.88e-21,19;UBERON:0008836,1.88e-21,19;UBERON:0008835,1.33e-18,22;UBERON:0003894,1.33e-18,22;UBERON:0009854,8.09e-18,23;UBERON:0007499,1.95e-16,25;UBERON:0009497,1.95e-16,25;UBERON:0000015,1.95e-16,25;UBERON:0002423,1.95e-16,25;UBERON:0006235,1.95e-16,25;UBERON:0004161,1.95e-16,25;UBERON:0009856,8.00e-16,26;UBERON:0002365,2.38e-13,31;UBERON:0002330,2.38e-13,31;UBERON:0002368,7.06e-12,35;UBERON:0000949,2.48e-09,45;UBERON:0003929,7.73e-08,54;UBERON:0005172,7.73e-08,54;UBERON:0005173,7.73e-08,54;UBERON:0002530,3.33e-07,59;UBERON:0002417,4.34e-07,60;UBERON:0000916,4.34e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,3.9313088667105,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05854594449042,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95691030930823,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.463044948647668,1.5299169235277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@C8G | |||
}} |
Latest revision as of 14:19, 16 September 2015
Short description: | p5@C8G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C8G_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -88bp_to_ENST00000371634, NM_000606, uc004cka.2_5end |
EntrezGene: | C8G |
HGNC: | 1354 |
UniProt: | Q5SQ08P07360 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.00e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.88e-21 | 19 |
digestive gland | 1.88e-21 | 19 |
liver bud | 1.88e-21 | 19 |
hepatic diverticulum | 1.33e-18 | 22 |
liver primordium | 1.33e-18 | 22 |
digestive tract diverticulum | 8.09e-18 | 23 |
epithelial sac | 1.95e-16 | 25 |
epithelium of foregut-midgut junction | 1.95e-16 | 25 |
anatomical boundary | 1.95e-16 | 25 |
hepatobiliary system | 1.95e-16 | 25 |
foregut-midgut junction | 1.95e-16 | 25 |
septum transversum | 1.95e-16 | 25 |
sac | 8.00e-16 | 26 |
exocrine gland | 2.38e-13 | 31 |
exocrine system | 2.38e-13 | 31 |
endocrine gland | 7.06e-12 | 35 |
endocrine system | 2.48e-09 | 45 |
gut epithelium | 7.73e-08 | 54 |
abdomen element | 7.73e-08 | 54 |
abdominal segment element | 7.73e-08 | 54 |
gland | 3.33e-07 | 59 |
abdominal segment of trunk | 4.34e-07 | 60 |
abdomen | 4.34e-07 | 60 |