FFCP PHASE1:Hg19::chr3:169482623..169482634,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=11727 | |HGNC=11727 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=200bp_to_ENST00000363312_5end | |association_with_transcript=200bp_to_ENST00000363312_5end | ||
|cluster_id=chr3:169482623..169482634,- | |||
|coexpression_cluster_id=C1658 | |coexpression_cluster_id=C1658 | ||
|description=CAGE_peak_4_at_TERC_5end | |description=CAGE_peak_4_at_TERC_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002521;8.17e-11;3!CL:0002564;1.09e-10;3 | |ontology_enrichment_celltype_v019=CL:0002521;8.17e-11;3!CL:0002564;1.09e-10;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002521,7.42e-11,3;CL:0002564,1.20e-10,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;1.96e-08;4!DOID:1612;1.96e-08;4 | |ontology_enrichment_disease_v019=DOID:5093;1.96e-08;4!DOID:1612;1.96e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,1.96e-08,4;DOID:1612,1.96e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001443!3.18e-08!11;UBERON:0000310!6.18e-07!10 | |ontology_enrichment_uberon=UBERON:0001443!3.18e-08!11;UBERON:0000310!6.18e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;8.17e-11;3!UBERON:0002242;1.09e-10;3!UBERON:0002072;5.38e-07;5!UBERON:0011135;6.39e-07;5!UBERON:0002216;6.39e-07;5!UBERON:0011134;6.39e-07;5!UBERON:0002209;6.39e-07;5!UBERON:0002213;6.39e-07;5!UBERON:0007844;6.39e-07;5!UBERON:0011138;6.39e-07;5!UBERON:0001130;6.39e-07;5!UBERON:0001066;6.39e-07;5!UBERON:0001468;6.39e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002190;8.17e-11;3!UBERON:0002242;1.09e-10;3!UBERON:0002072;5.38e-07;5!UBERON:0011135;6.39e-07;5!UBERON:0002216;6.39e-07;5!UBERON:0011134;6.39e-07;5!UBERON:0002209;6.39e-07;5!UBERON:0002213;6.39e-07;5!UBERON:0007844;6.39e-07;5!UBERON:0011138;6.39e-07;5!UBERON:0001130;6.39e-07;5!UBERON:0001066;6.39e-07;5!UBERON:0001468;6.39e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,7.42e-11,3;UBERON:0002242,1.20e-10,3;UBERON:0003068,1.20e-10,3;UBERON:0002328,1.20e-10,3;UBERON:0004880,1.20e-10,3;UBERON:0002072,5.08e-07,5;UBERON:0011135,6.77e-07,5;UBERON:0002216,6.77e-07,5;UBERON:0011134,6.77e-07,5;UBERON:0002209,6.77e-07,5;UBERON:0002213,6.77e-07,5;UBERON:0005856,6.77e-07,5;UBERON:0005866,6.77e-07,5;UBERON:0005863,6.77e-07,5;UBERON:0007844,6.77e-07,5;UBERON:0011138,6.77e-07,5;UBERON:0001130,6.77e-07,5;UBERON:0001066,6.77e-07,5;UBERON:0001468,6.77e-07,5 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0,0.522371256399677,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0,0,10.3473071292505,0,0.184369168541703,0,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0,0.275673144969061,0,0.145016693914229,0.0852266274161009,0,0,0,0,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0,0.222886768554957,0,0,0,0,0,0,0.333926115068718,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,1.22206028986725,0,0.247127877893006,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0,0,0,0,0.0730893170861856,0,0,0.176512253383001,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.550157746388935,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0.358177682162975,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0.39997479170986,0,0,0,0.368211900503681,0.139879507719444,0,0,0.107824811396682,0,0,0.33946505990805,0,0.247871528518004,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0,0,0,0,0,0,0,0.785720083444267,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0.940634592723046,0.245148321753905,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.633492505057185,2.2437542543236,0,0.275684698604535,0,0.454672189309436,0,0,0,0,0,0.129177819672012,0,0,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0.179650404213174,0,0,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0,0.522371256399677,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0,0,10.3473071292505,0,0.184369168541703,0,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0,0.275673144969061,0,0.145016693914229,0.0852266274161009,0,0,0,0,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0,0.222886768554957,0,0,0,0,0,0,0.333926115068718,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,1.22206028986725,0,0.247127877893006,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0,0,0,0,0.0730893170861856,0,0,0.176512253383001,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.550157746388935,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0.358177682162975,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0.39997479170986,0,0,0,0.368211900503681,0.139879507719444,0,0,0.107824811396682,0,0,0.33946505990805,0,0.247871528518004,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0,0,0,0,0,0,0,0.785720083444267,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0.940634592723046,0.245148321753905,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.633492505057185,2.2437542543236,0,0.275684698604535,0,0.454672189309436,0,0,0,0,0,0.129177819672012,0,0,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0.179650404213174,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p4@TERC | |short_description=p4@TERC | ||
}} | }} |
Latest revision as of 14:50, 16 September 2015
Short description: | p4@TERC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TERC_5end |
Coexpression cluster: | C1658_Osteoblast_Adipocyte_immature_MCF7_blood_Neurons_Neutrophils |
Association with transcript: | 200bp_to_ENST00000363312_5end |
EntrezGene: | NA |
HGNC: | 11727 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 7.42e-11 | 3 |
nucleus pulposus cell of intervertebral disc | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 7.42e-11 | 3 |
nucleus pulposus | 1.20e-10 | 3 |
axial mesoderm | 1.20e-10 | 3 |
notochord | 1.20e-10 | 3 |
chordamesoderm | 1.20e-10 | 3 |
hypodermis | 5.08e-07 | 5 |
intervertebral cartilage | 6.77e-07 | 5 |
symphysis | 6.77e-07 | 5 |
nonsynovial joint | 6.77e-07 | 5 |
fibrous joint | 6.77e-07 | 5 |
cartilaginous joint | 6.77e-07 | 5 |
developing mesenchymal condensation | 6.77e-07 | 5 |
pre-cartilage condensation | 6.77e-07 | 5 |
cartilaginous condensation | 6.77e-07 | 5 |
cartilage element | 6.77e-07 | 5 |
post-cranial axial skeletal system | 6.77e-07 | 5 |
vertebral column | 6.77e-07 | 5 |
intervertebral disk | 6.77e-07 | 5 |
intervertebral joint | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.96e-08 | 4 |
breast cancer | 1.96e-08 | 4 |