FFCP PHASE1:Hg19::chr7:138144947..138144954,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:138144947..138144954,+ to FFCP PHASE1:Hg19::chr7:138144947..138144954,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8805 | |EntrezGene=8805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11812 | |HGNC=11812 | ||
|TSSclassifier=strong | |||
|UniProt=F8WCX0 | |UniProt=F8WCX0 | ||
|association_with_transcript=0bp_to_ENST00000439939_5end | |||
|cluster_id=chr7:138144947..138144954,+ | |||
|description=CAGE_peak_13_at_TRIM24_5end | |||
|id=chr7:138144947..138144954,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.86e-07;7!CL:0000586;5.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.39e-07,7;CL:0000586,6.39e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.05e-36;10!UBERON:0005564;3.05e-36;10!UBERON:0006215;1.71e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!7.20e-14!86;UBERON:0001017!2.59e-13!82;UBERON:0000955!6.64e-13!69;UBERON:0006238!6.64e-13!69;UBERON:0000073!6.68e-13!94;UBERON:0001016!6.68e-13!94;UBERON:0002616!1.65e-12!59;UBERON:0001049!4.01e-12!57;UBERON:0005068!4.01e-12!57;UBERON:0006241!4.01e-12!57;UBERON:0007135!4.01e-12!57;UBERON:0003075!1.05e-11!86;UBERON:0007284!1.05e-11!86;UBERON:0002346!1.15e-10!90;UBERON:0002780!2.73e-09!41;UBERON:0001890!2.73e-09!41;UBERON:0006240!2.73e-09!41;UBERON:0007023!2.93e-09!115;UBERON:0000153!6.43e-09!129;UBERON:0007811!6.43e-09!129;UBERON:0003080!6.45e-09!42;UBERON:0003056!7.88e-09!61;UBERON:0001893!8.40e-09!34;UBERON:0002020!1.06e-08!34;UBERON:0003528!1.06e-08!34;UBERON:0000033!2.48e-08!123;UBERON:0002791!4.83e-08!33;UBERON:0004121!6.68e-08!169;UBERON:0001869!8.05e-08!32;UBERON:0000924!2.14e-07!173;UBERON:0006601!2.14e-07!173;UBERON:0000064!9.08e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.04e-45;8!UBERON:0003135;4.79e-33;11!UBERON:0000991;8.78e-18;21!UBERON:0003101;5.13e-17;22!UBERON:0000079;5.13e-17;22!UBERON:0002037;6.55e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.81e-45,8;UBERON:0003135,5.96e-33,11;UBERON:0000991,9.85e-18,21;UBERON:0009196,9.85e-18,21;UBERON:0009117,9.85e-18,21;UBERON:0005564,9.85e-18,21;UBERON:0004176,5.72e-17,22;UBERON:0003101,5.72e-17,22;UBERON:0000079,5.72e-17,22;UBERON:0002323,1.51e-08,46;UBERON:0003133,3.19e-08,48;UBERON:0004458,4.54e-08,49;UBERON:0002037,5.92e-08,6;UBERON:0006215,5.92e-08,6;UBERON:0003886,2.17e-07,54;UBERON:0005156,8.00e-07,59;UBERON:0000990,8.00e-07,59;UBERON:0001048,8.66e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0.125542639594803,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0,0,0,0.369754010166788,0.154934401160603,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.851363990735132,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.348581828608555,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0.790204397959275,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.112085143993527,0,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0.144269212976445,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0.241192877250816,1.52581736317083,0.663475559587348,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0.31396051279005,0,0.225595660617181,0,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0.0821154570532092,0.193978032976839,0.529536760149002,0,0,0,0.253243183823515,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,1.16495949527454,0.0787831823072236,0.0824158583811665,0.202210631562555,0.0984274815147488,0,0,0.136203406111576,0.160753148465019,0,0.415440338029185,0.2249738915515,0,0.242998226632099,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0.496166021811951,0.395223263795889,0.243585196761792,0,0,0,0,0,0.785270481251171,0,0.244052529803926,0,0,0.110929051536852,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0.127894371303652,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.504143392443436,0.0691572524642179,0.322951291263702,0,0.196295437002051,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0.261906694481422,0.163771917510097,0,0.337687923091973,0,0.206686796501184,0,0,0,0,0,0,0,0,0.606965604236632,0.455324382702595,0.0887023701626388,0,0,0.40781839786099,0.197318320688547,0.118193840883968,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0.142953088353313,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0.596852325484105,0.118920090777569,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0.470317296361523,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0.252332849670158,0.437062287854782,0,0.305966489225945,0.26721740526556,0.0918948995348449,1.0028301571695,2.27336094654718,1.07185652062471,0,0.103432995861895,0,0,0.193766729508018,0.124149428591716,0,0.0636471582781649,0,0,0.342233301085281,0,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0.125542639594803,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0,0,0,0.369754010166788,0.154934401160603,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.851363990735132,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.348581828608555,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0.790204397959275,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.112085143993527,0,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0.144269212976445,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0.241192877250816,1.52581736317083,0.663475559587348,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0.31396051279005,0,0.225595660617181,0,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0.0821154570532092,0.193978032976839,0.529536760149002,0,0,0,0.253243183823515,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,1.16495949527454,0.0787831823072236,0.0824158583811665,0.202210631562555,0.0984274815147488,0,0,0.136203406111576,0.160753148465019,0,0.415440338029185,0.2249738915515,0,0.242998226632099,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0.496166021811951,0.395223263795889,0.243585196761792,0,0,0,0,0,0.785270481251171,0,0.244052529803926,0,0,0.110929051536852,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0.127894371303652,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.504143392443436,0.0691572524642179,0.322951291263702,0,0.196295437002051,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0.261906694481422,0.163771917510097,0,0.337687923091973,0,0.206686796501184,0,0,0,0,0,0,0,0,0.606965604236632,0.455324382702595,0.0887023701626388,0,0,0.40781839786099,0.197318320688547,0.118193840883968,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0.142953088353313,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0.596852325484105,0.118920090777569,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0.470317296361523,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0.252332849670158,0.437062287854782,0,0.305966489225945,0.26721740526556,0.0918948995348449,1.0028301571695,2.27336094654718,1.07185652062471,0,0.103432995861895,0,0,0.193766729508018,0.124149428591716,0,0.0636471582781649,0,0,0.342233301085281,0,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p13@TRIM24 | |||
}} | }} |
Latest revision as of 14:54, 16 September 2015
Short description: | p13@TRIM24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TRIM24_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000439939_5end |
EntrezGene: | TRIM24 |
HGNC: | 11812 |
UniProt: | F8WCX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.39e-07 | 7 |
germ cell | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 6.81e-45 | 8 |
male reproductive organ | 5.96e-33 | 11 |
gonad | 9.85e-18 | 21 |
indifferent external genitalia | 9.85e-18 | 21 |
indifferent gonad | 9.85e-18 | 21 |
gonad primordium | 9.85e-18 | 21 |
external genitalia | 5.72e-17 | 22 |
male organism | 5.72e-17 | 22 |
male reproductive system | 5.72e-17 | 22 |
body cavity | 1.51e-08 | 46 |
reproductive organ | 3.19e-08 | 48 |
body cavity or lining | 4.54e-08 | 49 |
cerebellum | 5.92e-08 | 6 |
rhombic lip | 5.92e-08 | 6 |
body cavity precursor | 2.17e-07 | 54 |
reproductive structure | 8.00e-07 | 59 |
reproductive system | 8.00e-07 | 59 |
primordium | 8.66e-07 | 160 |