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FFCP PHASE1:Hg19::chr2:11674163..11674179,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=9687
|EntrezGene=9687
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=24885
|HGNC=24885
|TSSclassifier=strong
|UniProt=Q4ZG55
|UniProt=Q4ZG55
|association_with_transcript=-62bp_to_ENST00000381486,NM_014668,uc002rbk.1_5end
|association_with_transcript=-62bp_to_ENST00000381486,NM_014668,uc002rbk.1_5end
|cluster_id=chr2:11674163..11674179,+
|coexpression_cluster_id=C262
|description=CAGE_peak_9_at_GREB1_5end
|description=CAGE_peak_9_at_GREB1_5end
|id=chr2:11674163..11674179,+
|id=chr2:11674163..11674179,+
|ontology_enrichment_celltype=CL:0002541!1.21e-24!3
|ontology_enrichment_celltype=CL:0002541!1.21e-24!3
|ontology_enrichment_celltype_v019=CL:0002541;7.49e-07;3
|ontology_enrichment_celltype_v019_2=CL:0002541,7.28e-07,3
|ontology_enrichment_development_v019=UBERON:0003124;3.75e-18;1!UBERON:0005795;1.16e-07;10
|ontology_enrichment_disease=DOID:5093!3.16e-19!4;DOID:1612!3.16e-19!4
|ontology_enrichment_disease=DOID:5093!3.16e-19!4;DOID:1612!3.16e-19!4
|ontology_enrichment_disease_v019=DOID:5093;1.04e-37;4!DOID:1612;1.04e-37;4!DOID:171;1.57e-07;10
|ontology_enrichment_disease_v019_2=DOID:5093,8.65e-38,4;DOID:1612,8.65e-38,4;DOID:171,1.62e-07,10
|ontology_enrichment_uberon=UBERON:0000476!1.21e-24!3;UBERON:0000920!1.21e-24!3;UBERON:0003124!9.16e-19!7;UBERON:0005631!2.88e-14!14;UBERON:0000158!2.88e-14!14;UBERON:0001882!2.16e-09!1;UBERON:0005403!2.16e-09!1;UBERON:0001301!2.55e-09!1;UBERON:0002336!3.83e-09!1;UBERON:0001018!3.83e-09!1;UBERON:0002473!3.83e-09!1;UBERON:0005340!3.83e-09!1;UBERON:0002316!3.83e-09!1;UBERON:0003544!3.83e-09!1;UBERON:0001020!3.83e-09!1;UBERON:0005970!3.83e-09!1;UBERON:0002437!3.83e-09!1;UBERON:0006834!4.50e-09!1;UBERON:0000478!2.98e-08!24;UBERON:0000310!5.33e-08!10;UBERON:0007023!7.39e-08!115;UBERON:0001443!2.60e-07!11
|ontology_enrichment_uberon_v019=UBERON:0002050;2.58e-30;5!UBERON:0005423;2.58e-30;5!UBERON:0005795;4.44e-18;1!UBERON:0002346;2.02e-17;4!UBERON:0000923;2.02e-17;4!UBERON:0010316;2.02e-17;4!UBERON:0005291;2.02e-17;4!UBERON:0000310;1.54e-15;10!UBERON:0001443;3.45e-14;11!UBERON:0003124;7.49e-07;3!UBERON:0000920;7.49e-07;3
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.43e-15,10;UBERON:0001443,3.23e-14,11;UBERON:0003124,1.53e-10,7;UBERON:0005795,1.98e-07,22;UBERON:0000920,7.28e-07,3
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95102198979638,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,12.7609602931764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15460723810632,0,0,0,0,4.78501739597879,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2754495206101,0,0,0,0,0,0,0,0.834979926253974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9975342069321,0,0,0,0,0,0,0,0,0,0,0,0,4.74852359770976,0,0,0,0,0,11.1764986404925,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,9.35861210126198,0,0,0
|short_description=p9@GREB1
|short_description=p9@GREB1
}}
}}

Latest revision as of 14:59, 16 September 2015

Short description:p9@GREB1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_9_at_GREB1_5end
Coexpression cluster:C262_breast_MCF7_skeletal_Reticulocytes_mucinous_hepatoblastoma_Wilms
Association with transcript: -62bp_to_ENST00000381486, NM_014668, uc002rbk.1_5end
EntrezGene:GREB1
HGNC: 24885
UniProt: Q4ZG55
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data