FFCP PHASE1:Hg19::chr5:158526693..158526706,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1879 | |EntrezGene=1879 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3126 | |HGNC=3126 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000380654_5end | |association_with_transcript=0bp_to_ENST00000380654_5end | ||
|cluster_id=chr5:158526693..158526706,- | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_8_at_EBF1_5end | |description=CAGE_peak_8_at_EBF1_5end | ||
|id=chr5:158526693..158526706,- | |id=chr5:158526693..158526706,- | ||
|ontology_enrichment_celltype=CL:0000945!7.44e-34!24;CL:0000826!7.44e-34!24;CL:0000236!6.56e-21!14;CL:0000542!1.01e-12!53;CL:0000051!1.01e-12!53;CL:0000838!7.25e-12!52;CL:0000080!7.57e-08!6 | |ontology_enrichment_celltype=CL:0000945!7.44e-34!24;CL:0000826!7.44e-34!24;CL:0000236!6.56e-21!14;CL:0000542!1.01e-12!53;CL:0000051!1.01e-12!53;CL:0000838!7.25e-12!52;CL:0000080!7.57e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000945;9.39e-85;24!CL:0000236;3.97e-71;13!CL:0000542;6.28e-31;53!CL:0000785;4.07e-08;1!CL:0000819;4.07e-08;1!CL:0000817;6.52e-08;1!CL:0002087;6.64e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.26e-85,24;CL:0000826,3.26e-85,24;CL:0000236,2.62e-66,14;CL:0000542,6.78e-41,53;CL:0000051,6.78e-41,53;CL:0000838,2.13e-37,52;CL:0002087,1.35e-16,115;CL:0002031,5.54e-14,120;CL:0000738,1.85e-13,136;CL:0002032,8.66e-11,161;CL:0000837,8.66e-11,161;CL:0000988,1.01e-10,177;CL:0000037,3.49e-10,168;CL:0000817,7.15e-10,3;CL:0000819,3.80e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;6.28e-31;53!UBERON:0001045;4.98e-08;1!UBERON:0000358;6.52e-08;1!UBERON:0004874;1.26e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.84e-16;10!DOID:0060073;4.07e-08;1!DOID:8675;4.07e-08;1!DOID:12603;1.26e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.62e-16,10;DOID:0060073,3.80e-08,1;DOID:8675,3.80e-08,1;DOID:12603,1.44e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.78e-09!15;UBERON:0000179!2.78e-09!15;UBERON:0000463!2.78e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;4.98e-08;1!UBERON:0001153;4.98e-08;1!UBERON:0009854;4.98e-08;1!UBERON:0002372;1.26e-07;1!UBERON:0000989;1.26e-07;1!UBERON:0007195;1.26e-07;1!UBERON:0008811;1.26e-07;1!UBERON:0001961;1.26e-07;1!UBERON:0001744;1.26e-07;1!UBERON:0001042;1.26e-07;1!UBERON:0001735;1.26e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.33e-08,1;UBERON:0001153,5.33e-08,1;UBERON:0001045,5.33e-08,1;UBERON:0000989,1.04e-07,1;UBERON:0008811,1.04e-07,1;UBERON:0006258,1.04e-07,1;UBERON:0005876,1.04e-07,1;UBERON:0004874,1.04e-07,1;UBERON:0007195,1.54e-07,1;UBERON:0002372,1.99e-07,1;UBERON:0001961,1.99e-07,1;UBERON:0001744,1.99e-07,1;UBERON:0001735,1.99e-07,1 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,1.52826811495903,0.985207073399349,1.02324015707783,0,0,0,0,0,0,1.23947520928483,3.2698923472107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0.622822248995575,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,3.82297027883492,2.66852776159066,4.26730222566507,1.60158394814405,4.59801951963587,0.661044872784862,2.86216126360609,16.507176104174,18.79159005987,16.4377488093848,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.391602314925481,0.343143423810856,0.413536052245775,0.215714200818617,0.533637789017222,0,0,0,0,0.306923946576125,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0.290033387828457,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.822724546172388,0,1.08006287447623,0.79312517629427,0,0,0,1.11481905075431,2.59684583357601,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,3.03912307084262,0,0,1.6001024709939,0,0,0,0,0.394573622547734,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0.694499979733169,0,0,0,0.221158519862449,0,0.438770794307945,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,2.07564790076435,0.494255755786011,0.313265848516366,0,0.802577647298789,0,4.74382451960732,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0.0984274815147488,0.592713324460491,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.314408610199332,0,0,0,5.72425212390211,0,0.544017803369474,0.5013797880454,0.919036730290385,0.327872630709804,0,0,0,0.1251909307065,0,0.221858103073705,0,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0,0.327609848846413,0,0,0,0,0.516644938982447,0,0,0,0,0.511577485214607,0.107824811396682,0,0.436838552768056,0,1.06287460050841,0.123935764259002,0,0,5.04715168008021,0,0,0,0,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0.703484977438482,0,0.535701835878287,0,0,0,0.177404740325278,0.691403925334676,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.490296643507811,0,0,0,0.4226557275834,0,0.375935671919414,0.966868319603658,1.19929387109915,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.476128862927481,0,0.124149428591716,0,0,0.202117188958219,0.435433495793923,0.342233301085281,1.01028079521881,0,0.665320713092027,0,0,0,0,2.34640942403454,0.611207220914332,0.406896178315738,0,0.805095174364105,0.641136984606466 | |phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,1.52826811495903,0.985207073399349,1.02324015707783,0,0,0,0,0,0,1.23947520928483,3.2698923472107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0.622822248995575,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,3.82297027883492,2.66852776159066,4.26730222566507,1.60158394814405,4.59801951963587,0.661044872784862,2.86216126360609,16.507176104174,18.79159005987,16.4377488093848,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.391602314925481,0.343143423810856,0.413536052245775,0.215714200818617,0.533637789017222,0,0,0,0,0.306923946576125,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0.290033387828457,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.822724546172388,0,1.08006287447623,0.79312517629427,0,0,0,1.11481905075431,2.59684583357601,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,3.03912307084262,0,0,1.6001024709939,0,0,0,0,0.394573622547734,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0.694499979733169,0,0,0,0.221158519862449,0,0.438770794307945,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,2.07564790076435,0.494255755786011,0.313265848516366,0,0.802577647298789,0,4.74382451960732,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0.0984274815147488,0.592713324460491,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.314408610199332,0,0,0,5.72425212390211,0,0.544017803369474,0.5013797880454,0.919036730290385,0.327872630709804,0,0,0,0.1251909307065,0,0.221858103073705,0,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0,0.327609848846413,0,0,0,0,0.516644938982447,0,0,0,0,0.511577485214607,0.107824811396682,0,0.436838552768056,0,1.06287460050841,0.123935764259002,0,0,5.04715168008021,0,0,0,0,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0.703484977438482,0,0.535701835878287,0,0,0,0.177404740325278,0.691403925334676,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.490296643507811,0,0,0,0.4226557275834,0,0.375935671919414,0.966868319603658,1.19929387109915,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.476128862927481,0,0.124149428591716,0,0,0.202117188958219,0.435433495793923,0.342233301085281,1.01028079521881,0,0.665320713092027,0,0,0,0,2.34640942403454,0.611207220914332,0.406896178315738,0,0.805095174364105,0.641136984606466 | ||
|short_description=p8@EBF1 | |short_description=p8@EBF1 | ||
}} | }} |
Latest revision as of 15:08, 16 September 2015
Short description: | p8@EBF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_EBF1_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | 0bp_to_ENST00000380654_5end |
EntrezGene: | EBF1 |
HGNC: | 3126 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.26e-85 | 24 |
pro-B cell | 3.26e-85 | 24 |
B cell | 2.62e-66 | 14 |
lymphocyte | 6.78e-41 | 53 |
common lymphoid progenitor | 6.78e-41 | 53 |
lymphoid lineage restricted progenitor cell | 2.13e-37 | 52 |
nongranular leukocyte | 1.35e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 5.54e-14 | 120 |
leukocyte | 1.85e-13 | 136 |
hematopoietic oligopotent progenitor cell | 8.66e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.66e-11 | 161 |
hematopoietic cell | 1.01e-10 | 177 |
hematopoietic stem cell | 3.49e-10 | 168 |
precursor B cell | 7.15e-10 | 3 |
B-1 B cell | 3.80e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.33e-08 | 1 |
caecum | 5.33e-08 | 1 |
midgut | 5.33e-08 | 1 |
penis | 1.04e-07 | 1 |
intromittent organ | 1.04e-07 | 1 |
lateral plate mesenchyme | 1.04e-07 | 1 |
undifferentiated genital tubercle | 1.04e-07 | 1 |
somatopleure | 1.04e-07 | 1 |
stroma of bone marrow | 1.54e-07 | 1 |
tonsil | 1.99e-07 | 1 |
mucosa-associated lymphoid tissue | 1.99e-07 | 1 |
lymphoid tissue | 1.99e-07 | 1 |
tonsillar ring | 1.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.62e-16 | 10 |
lymphatic system cancer | 3.80e-08 | 1 |
lymphosarcoma | 3.80e-08 | 1 |
acute leukemia | 1.44e-07 | 1 |