FFCP PHASE1:Hg19::chr19:18426906..18426915,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25804 | |EntrezGene=25804 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17259 | |HGNC=17259 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_AB463842,EU832676,EU832756_5end | |association_with_transcript=-30bp_to_AB463842,EU832676,EU832756_5end | ||
|cluster_id=chr19:18426906..18426915,- | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_7_at_LSM4_5end | |description=CAGE_peak_7_at_LSM4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002274!1.42e-66!5;CL:0000457!1.42e-66!5;CL:0002191!1.42e-66!5;CL:0000097!1.42e-66!5;CL:0000831!1.42e-66!5;CL:0002028!1.42e-66!5;CL:0000163!4.28e-37!9;CL:0000763!9.68e-11!112;CL:0000049!9.68e-11!112;CL:0002032!3.49e-10!165;CL:0000837!3.49e-10!165;CL:0000037!1.03e-09!172;CL:0000566!1.03e-09!172;CL:0000151!1.47e-09!35;CL:0000988!4.23e-09!182 | |ontology_enrichment_celltype=CL:0002274!1.42e-66!5;CL:0000457!1.42e-66!5;CL:0002191!1.42e-66!5;CL:0000097!1.42e-66!5;CL:0000831!1.42e-66!5;CL:0002028!1.42e-66!5;CL:0000163!4.28e-37!9;CL:0000763!9.68e-11!112;CL:0000049!9.68e-11!112;CL:0002032!3.49e-10!165;CL:0000837!3.49e-10!165;CL:0000037!1.03e-09!172;CL:0000566!1.03e-09!172;CL:0000151!1.47e-09!35;CL:0000988!4.23e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.49e-79;5!CL:0000163;9.75e-45;9!CL:0000151;1.65e-10;36 | |ontology_enrichment_celltype_v019=CL:0000097;3.49e-79;5!CL:0000163;9.75e-45;9!CL:0000151;1.65e-10;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.49e-79,5;CL:0002028,3.49e-79,5;CL:0000163,9.75e-45,9;CL:0000151,2.91e-12,36;CL:0000839,3.65e-07,66;CL:0000557,4.47e-07,67 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:8552!1.07e-14!1;DOID:8692!8.25e-11!31;DOID:1240!1.40e-08!39;DOID:1036!1.27e-07!8 | |ontology_enrichment_disease=DOID:8552!1.07e-14!1;DOID:8692!8.25e-11!31;DOID:1240!1.40e-08!39;DOID:1036!1.27e-07!8 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p7@LSM4 | |short_description=p7@LSM4 | ||
}} | }} |
Latest revision as of 15:35, 16 September 2015
Short description: | p7@LSM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LSM4_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -30bp_to_AB463842, EU832676, EU832756_5end |
EntrezGene: | LSM4 |
HGNC: | 17259 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.49e-79 | 5 |
basophil mast progenitor cell | 3.49e-79 | 5 |
endocrine cell | 9.75e-45 | 9 |
secretory cell | 2.91e-12 | 36 |
myeloid lineage restricted progenitor cell | 3.65e-07 | 66 |
granulocyte monocyte progenitor cell | 4.47e-07 | 67 |