FFCP PHASE1:Hg19::chr4:16900198..16900214,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9079 | |EntrezGene=9079 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6533 | |HGNC=6533 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000441778_5end | |association_with_transcript=2bp_to_ENST00000441778_5end | ||
|cluster_id=chr4:16900198..16900214,- | |||
|coexpression_cluster_id=C1083 | |coexpression_cluster_id=C1083 | ||
|description=CAGE_peak_2_at_LDB2_5end | |description=CAGE_peak_2_at_LDB2_5end | ||
|id=chr4:16900198..16900214,- | |id=chr4:16900198..16900214,- | ||
|ontology_enrichment_celltype=CL:0002139!1.96e-12!24;CL:0000115!3.88e-10!35;CL:0000071!7.74e-09!18;CL:0002546!7.74e-09!18;CL:0002078!1.39e-07!44 | |ontology_enrichment_celltype=CL:0002139!1.96e-12!24;CL:0000115!3.88e-10!35;CL:0000071!7.74e-09!18;CL:0002546!7.74e-09!18;CL:0002078!1.39e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.55e-13;24!CL:0000115;1.06e-09;36!CL:0000071;2.60e-09;18!CL:0002078;9.67e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.33e-13,24;CL:0000115,1.29e-11,36;CL:0000071,2.22e-09,18;CL:0002546,2.22e-09,18;CL:0002078,7.74e-09,45 | |||
|ontology_enrichment_development_v019=CL:0002546;2.60e-09;18!UBERON:0006601;4.39e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.46e-30!115;UBERON:0003080!2.24e-24!42;UBERON:0002780!8.12e-24!41;UBERON:0001890!8.12e-24!41;UBERON:0006240!8.12e-24!41;UBERON:0001049!2.50e-22!57;UBERON:0005068!2.50e-22!57;UBERON:0006241!2.50e-22!57;UBERON:0007135!2.50e-22!57;UBERON:0001017!1.07e-21!82;UBERON:0001869!1.24e-21!32;UBERON:0001893!1.76e-21!34;UBERON:0005743!1.86e-21!86;UBERON:0002791!9.47e-21!33;UBERON:0002020!1.31e-20!34;UBERON:0003528!1.31e-20!34;UBERON:0000073!4.92e-20!94;UBERON:0001016!4.92e-20!94;UBERON:0002616!5.15e-20!59;UBERON:0002346!1.67e-19!90;UBERON:0000955!2.00e-19!69;UBERON:0006238!2.00e-19!69;UBERON:0002619!1.59e-17!22;UBERON:0000956!1.67e-17!25;UBERON:0000203!1.67e-17!25;UBERON:0003075!2.35e-17!86;UBERON:0007284!2.35e-17!86;UBERON:0001950!1.36e-16!20;UBERON:0003056!2.21e-16!61;UBERON:0004111!4.14e-14!241;UBERON:0000477!1.29e-13!286;UBERON:0000025!3.56e-13!194;UBERON:0000153!5.14e-13!129;UBERON:0007811!5.14e-13!129;UBERON:0000033!1.36e-12!123;UBERON:0000924!3.41e-12!173;UBERON:0006601!3.41e-12!173;UBERON:0004121!9.98e-11!169;UBERON:0000468!2.46e-09!659;UBERON:0000119!2.65e-09!312;UBERON:0000483!5.53e-09!309;UBERON:0001986!7.74e-09!18;UBERON:0004638!7.74e-09!18;UBERON:0004852!7.74e-09!18;UBERON:0006914!4.11e-07!25;UBERON:0000487!4.30e-07!22;UBERON:0001871!6.35e-07!7;UBERON:0000475!9.49e-07!365 | |ontology_enrichment_uberon=UBERON:0007023!4.46e-30!115;UBERON:0003080!2.24e-24!42;UBERON:0002780!8.12e-24!41;UBERON:0001890!8.12e-24!41;UBERON:0006240!8.12e-24!41;UBERON:0001049!2.50e-22!57;UBERON:0005068!2.50e-22!57;UBERON:0006241!2.50e-22!57;UBERON:0007135!2.50e-22!57;UBERON:0001017!1.07e-21!82;UBERON:0001869!1.24e-21!32;UBERON:0001893!1.76e-21!34;UBERON:0005743!1.86e-21!86;UBERON:0002791!9.47e-21!33;UBERON:0002020!1.31e-20!34;UBERON:0003528!1.31e-20!34;UBERON:0000073!4.92e-20!94;UBERON:0001016!4.92e-20!94;UBERON:0002616!5.15e-20!59;UBERON:0002346!1.67e-19!90;UBERON:0000955!2.00e-19!69;UBERON:0006238!2.00e-19!69;UBERON:0002619!1.59e-17!22;UBERON:0000956!1.67e-17!25;UBERON:0000203!1.67e-17!25;UBERON:0003075!2.35e-17!86;UBERON:0007284!2.35e-17!86;UBERON:0001950!1.36e-16!20;UBERON:0003056!2.21e-16!61;UBERON:0004111!4.14e-14!241;UBERON:0000477!1.29e-13!286;UBERON:0000025!3.56e-13!194;UBERON:0000153!5.14e-13!129;UBERON:0007811!5.14e-13!129;UBERON:0000033!1.36e-12!123;UBERON:0000924!3.41e-12!173;UBERON:0006601!3.41e-12!173;UBERON:0004121!9.98e-11!169;UBERON:0000468!2.46e-09!659;UBERON:0000119!2.65e-09!312;UBERON:0000483!5.53e-09!309;UBERON:0001986!7.74e-09!18;UBERON:0004638!7.74e-09!18;UBERON:0004852!7.74e-09!18;UBERON:0006914!4.11e-07!25;UBERON:0000487!4.30e-07!22;UBERON:0001871!6.35e-07!7;UBERON:0000475!9.49e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.96e-22;32!UBERON:0002791;1.20e-20;32!UBERON:0001893;1.32e-20;34!UBERON:0002619;1.47e-20;22!UBERON:0000956;9.17e-20;25!UBERON:0000203;9.17e-20;25!UBERON:0001950;1.66e-19;20!UBERON:0003528;2.24e-19;34!UBERON:0002020;2.24e-19;34!UBERON:0002780;1.43e-18;41!UBERON:0001890;1.43e-18;41!UBERON:0000073;1.13e-11;53!UBERON:0002616;1.13e-11;53!UBERON:0001017;1.45e-09;75!UBERON:0000955;2.11e-09;68!UBERON:0004638;2.60e-09;18!UBERON:0001986;2.60e-09;18!UBERON:0004852;2.60e-09;18!UBERON:0007023;1.04e-08;114!UBERON:0000922;5.98e-08;49!UBERON:0006914;6.46e-08;25!UBERON:0001016;6.87e-08;83!UBERON:0000487;8.51e-08;22!UBERON:0001871;3.59e-07;6!UBERON:0000200;8.59e-07;6 | |||
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| ||
|short_description=p2@LDB2 | |short_description=p2@LDB2 | ||
}} | }} |
Latest revision as of 15:36, 16 September 2015
Short description: | p2@LDB2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LDB2_5end |
Coexpression cluster: | C1083_lung_uterus_Endothelial_neuroectodermal_spleen_mesenchymal_occipital |
Association with transcript: | 2bp_to_ENST00000441778_5end |
EntrezGene: | LDB2 |
HGNC: | 6533 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data