FFCP PHASE1:Hg19::chr1:13910456..13910461,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10630 | |EntrezGene=10630 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29602 | |HGNC=29602 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETC6 | |UniProt=E7ETC6 | ||
|association_with_transcript=-126bp_to_ENST00000509009_5end | |||
|cluster_id=chr1:13910456..13910461,+ | |||
|description=CAGE_peak_4_at_PDPN_5end | |||
|id=chr1:13910456..13910461,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002619;2.99e-14;3!CL:0002144;4.08e-14;3!CL:0000153;4.55e-12;9!CL:0000447;4.55e-12;9!CL:0002195;2.88e-10;2!CL:0002571;2.88e-10;2!CL:0002078;1.17e-08;45!CL:0000138;2.48e-07;6!CL:0002138;2.48e-07;6!CL:0000327;4.07e-07;15!CL:0000115;7.88e-07;36!CL:0000499;8.86e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,3.45e-14,3;CL:0002619,3.77e-14,3;CL:0000153,5.80e-12,9;CL:0000447,5.80e-12,9;CL:0002195,2.90e-10,2;CL:0002571,2.90e-10,2;CL:0002078,9.18e-10,45;CL:0000115,1.48e-08,36;CL:0000213,1.64e-08,58;CL:0000215,1.64e-08,58;CL:0005020,2.09e-07,6;CL:0002138,2.09e-07,6;CL:0005022,2.09e-07,6;CL:0000058,3.42e-07,6;CL:0000138,3.42e-07,6;CL:0000327,4.67e-07,15 | |||
|ontology_enrichment_development_v019=CL:0005022;2.48e-07;6 | |||
|ontology_enrichment_disease=DOID:2394!1.38e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.82e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.07e-07,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;4.08e-14;3!UBERON:0001915;4.08e-14;3!UBERON:0001982;4.08e-14;3!UBERON:0005406;2.00e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,3.45e-14,3;UBERON:0001915,3.45e-14,3;UBERON:0001982,3.45e-14,3;UBERON:0005406,9.21e-10,2 | |||
|phase1_expression=0.726713517082227,0.214100523890983,2.25527046553554,0,0,1.74467704820074,2.53299878168311,0,0.261185628199839,0,0,0.436882744260345,1.84636884759917,0,0,0,0,0,0,0,0,0,0.85870796139317,0.821246550437305,0.251085279189606,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,2.23915474239924,3.2389366601898,1.28787783817093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,1.00267582127178,0.434539556882471,2.3858578411533,3.40644409211845,0.0945348171640679,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01414658554573,1.52054421143703,2.4406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0.966304265816484,1.36373060295417,0.860413786167011,0.487894824518382,0,0.232387885739037,0,0.252320850875628,1.45990943630332,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.329250856225877,0,0.201057944823262,0,0,0,0,0,0.117408694235822,2.59859605969933,1.38895653772983,3.61482889245737,0,0,0,0,0,0.93733833986777,1.6798212819886,1.27597587518148,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.797814349754612,0,0,0,0,2.57360388584666,0,0,0,2.13235169245527,0,1.50719688529793,0.871533458600294,0.599837947092342,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20956117331872,0.744323423456331,0,0,0.768834895534206,0,0.482561763430822,1.48418066444991,0,0.177561725313127,0.164254312027618,0.519254429183621,0,0,1.00253235151642,0.0920809889358963,0.574072240823034,0.182091168006717,2.09799063935079,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.976135183992909,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,0.386682873168488,0,0,0,0,0,0,0.445160178233687,1.98341898433174,0.192190067365106,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,1.97859703341646,1.09814811894422,0.589062011728432,0,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,1.47775344708365,1.31717957183961,0,0,0.288666338176536,1.34060455107157,1.08890984861323,0.188287601553558,1.29151611801369,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.779160935160341,0,0,0,0,0,1.02268682502155,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0,0,0,0.384751292518985,0.341826167541004,0,0,0,0.31900115973192,0.915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0.873633341210151,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.687697182986169,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.517131825446202,0,0,0,0.427149650270779,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.244052529803926,0,0,0.332787154610557,0.434674820589684,0.276697269872462,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0.228840068396924,0.151230923763239,0,0,0.477890301491107,2.69881867298163,0.465788870628778,0,1.06336685823198,0.521745061811734,1.80309130796662,0.380805212168795,0.813741466409323,0,1.18151612746737,0.464033759878494,1.19428766609585,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0,0,0,0.168942440653073,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,1.531227386766,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.376051641746286,0,0,0,0.49131575253029,0,0,0.781078098613847,0.206686796501184,0.126831620387814,0,0,0,0.879356221798103,0.255524855279191,0,0,0,0,0.354809480650555,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.571812353413251,0,0,0,0,1.24329698497822,1.53646629384555,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,1.11598505450025,0.924351257262837,0.432626562123789,0.252332849670158,0.327796715891087,0,0.407955318967927,0,0,0.752122617877125,0.682008283964155,0,0,0.103432995861895,0.639701945702943,0,0.129177819672012,0.124149428591716,0.224263725161227,0.25458863311266,0,0,0.342233301085281,0,0.430333232356058,0,0,0,0,0,0,0,0,0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| |phase1_expression=0.726713517082227,0.214100523890983,2.25527046553554,0,0,1.74467704820074,2.53299878168311,0,0.261185628199839,0,0,0.436882744260345,1.84636884759917,0,0,0,0,0,0,0,0,0,0.85870796139317,0.821246550437305,0.251085279189606,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,2.23915474239924,3.2389366601898,1.28787783817093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,1.00267582127178,0.434539556882471,2.3858578411533,3.40644409211845,0.0945348171640679,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01414658554573,1.52054421143703,2.4406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0.966304265816484,1.36373060295417,0.860413786167011,0.487894824518382,0,0.232387885739037,0,0.252320850875628,1.45990943630332,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.329250856225877,0,0.201057944823262,0,0,0,0,0,0.117408694235822,2.59859605969933,1.38895653772983,3.61482889245737,0,0,0,0,0,0.93733833986777,1.6798212819886,1.27597587518148,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.797814349754612,0,0,0,0,2.57360388584666,0,0,0,2.13235169245527,0,1.50719688529793,0.871533458600294,0.599837947092342,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20956117331872,0.744323423456331,0,0,0.768834895534206,0,0.482561763430822,1.48418066444991,0,0.177561725313127,0.164254312027618,0.519254429183621,0,0,1.00253235151642,0.0920809889358963,0.574072240823034,0.182091168006717,2.09799063935079,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.976135183992909,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,0.386682873168488,0,0,0,0,0,0,0.445160178233687,1.98341898433174,0.192190067365106,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,1.97859703341646,1.09814811894422,0.589062011728432,0,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,1.47775344708365,1.31717957183961,0,0,0.288666338176536,1.34060455107157,1.08890984861323,0.188287601553558,1.29151611801369,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.779160935160341,0,0,0,0,0,1.02268682502155,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0,0,0,0.384751292518985,0.341826167541004,0,0,0,0.31900115973192,0.915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0.873633341210151,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.687697182986169,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.517131825446202,0,0,0,0.427149650270779,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.244052529803926,0,0,0.332787154610557,0.434674820589684,0.276697269872462,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0.228840068396924,0.151230923763239,0,0,0.477890301491107,2.69881867298163,0.465788870628778,0,1.06336685823198,0.521745061811734,1.80309130796662,0.380805212168795,0.813741466409323,0,1.18151612746737,0.464033759878494,1.19428766609585,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0,0,0,0.168942440653073,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,1.531227386766,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.376051641746286,0,0,0,0.49131575253029,0,0,0.781078098613847,0.206686796501184,0.126831620387814,0,0,0,0.879356221798103,0.255524855279191,0,0,0,0,0.354809480650555,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.571812353413251,0,0,0,0,1.24329698497822,1.53646629384555,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,1.11598505450025,0.924351257262837,0.432626562123789,0.252332849670158,0.327796715891087,0,0.407955318967927,0,0,0.752122617877125,0.682008283964155,0,0,0.103432995861895,0.639701945702943,0,0.129177819672012,0.124149428591716,0.224263725161227,0.25458863311266,0,0,0.342233301085281,0,0.430333232356058,0,0,0,0,0,0,0,0,0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| ||
|short_description=p4@PDPN | |||
}} | }} |
Latest revision as of 15:45, 16 September 2015
Short description: | p4@PDPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PDPN_5end |
Coexpression cluster: | NA |
Association with transcript: | -126bp_to_ENST00000509009_5end |
EntrezGene: | PDPN |
HGNC: | 29602 |
UniProt: | E7ETC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 3.45e-14 | 3 |
adult endothelial progenitor cell | 3.77e-14 | 3 |
GAG secreting cell | 5.80e-12 | 9 |
carbohydrate secreting cell | 5.80e-12 | 9 |
hepatic stem cell | 2.90e-10 | 2 |
hepatic mesenchymal stem cell | 2.90e-10 | 2 |
meso-epithelial cell | 9.18e-10 | 45 |
endothelial cell | 1.48e-08 | 36 |
lining cell | 1.64e-08 | 58 |
barrier cell | 1.64e-08 | 58 |
lymphangioblast | 2.09e-07 | 6 |
endothelial cell of lymphatic vessel | 2.09e-07 | 6 |
vascular lymphangioblast | 2.09e-07 | 6 |
chondroblast | 3.42e-07 | 6 |
chondrocyte | 3.42e-07 | 6 |
extracellular matrix secreting cell | 4.67e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 3.45e-14 | 3 |
endothelium of capillary | 3.45e-14 | 3 |
capillary | 3.45e-14 | 3 |
perirenal fat | 9.21e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.07e-07 | 14 |