FFCP PHASE1:Hg19::chr1:23857087..23857100,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1870 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3114 | |||
|TSSclassifier=strong | |||
|UniProt=Q5U0J0 | |||
|association_with_transcript=184bp_to_BT019523_5end | |||
|cluster_id=chr1:23857087..23857100,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_8_at_E2F2_5end | |||
|id=chr1:23857087..23857100,- | |||
|ontology_enrichment_celltype=CL:0000945!3.66e-09!24;CL:0000826!3.66e-09!24;CL:0002150!2.58e-08!3;CL:0000861!2.58e-08!3;CL:0000764!5.80e-07!2;CL:0000765!5.80e-07!2;CL:0000050!5.80e-07!2;CL:0000038!5.80e-07!2;CL:0000558!5.80e-07!2;CL:0000547!5.80e-07!2;CL:0000549!5.80e-07!2;CL:0000550!5.80e-07!2;CL:0000552!5.80e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.78e-09;2!CL:0000558;1.78e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.71e-09,2;CL:0000765,1.71e-09,2;CL:0000050,1.71e-09,2;CL:0000038,1.71e-09,2;CL:0000558,1.71e-09,2;CL:0000547,1.71e-09,2;CL:0000549,1.71e-09,2;CL:0000550,1.71e-09,2;CL:0000552,1.71e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!1.86e-12!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.84e-15!15;UBERON:0000179!6.84e-15!15;UBERON:0000463!6.84e-15!15;UBERON:0004177!2.74e-09!7;UBERON:0002106!4.64e-08!3;UBERON:0004854!4.64e-08!3;UBERON:0009034!4.64e-08!3;UBERON:0002095!4.64e-08!3;UBERON:0004782!4.64e-08!3;UBERON:0003281!4.64e-08!3;UBERON:0009664!4.64e-08!3;UBERON:0002296!4.64e-08!3;UBERON:0005602!4.64e-08!3;UBERON:0001179!4.64e-08!3;UBERON:0006293!4.64e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.06e-88;15!UBERON:0000179;2.06e-88;15!UBERON:0000463;2.06e-88;15!UBERON:0002390;9.99e-38;32!UBERON:0002193;5.48e-21;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.77e-88,15;UBERON:0000179,1.77e-88,15;UBERON:0000463,1.77e-88,15;UBERON:0007023,8.57e-14,114;UBERON:0002390,6.09e-13,98;UBERON:0003061,6.09e-13,98;UBERON:0004535,1.09e-11,109;UBERON:0002193,1.09e-11,108;UBERON:0001009,2.35e-11,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.382067028739756,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0.46480320348181,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,1.11410456885174,0,0,0.270803863765016,1.28091319725675,0.520237390239513,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0.906474741580529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,1.5686127061494,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.64150457541122,6.88173486428138,3.98753031021914,1.66762242820452,2.87953591160336,7.13320642311989,8.10047155857172,7.13812658664843,0,0,0,0.371606350251437,0.144269212976445,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.780103689942349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.19351266257817,0.365446585430928,0.0821154570532092,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.423366660328922,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0.467878926924211,0,0,0.33883824611688,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581300188524055,0.496597714366863,0,0,0,0.217716747896961,0,0.202056159043763,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | |||
|short_description=p8@E2F2 | |||
}} |
Latest revision as of 15:58, 16 September 2015
Short description: | p8@E2F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_E2F2_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 184bp_to_BT019523_5end |
EntrezGene: | E2F2 |
HGNC: | 3114 |
UniProt: | Q5U0J0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.71e-09 | 2 |
erythroblast | 1.71e-09 | 2 |
megakaryocyte-erythroid progenitor cell | 1.71e-09 | 2 |
erythroid progenitor cell | 1.71e-09 | 2 |
reticulocyte | 1.71e-09 | 2 |
proerythroblast | 1.71e-09 | 2 |
basophilic erythroblast | 1.71e-09 | 2 |
polychromatophilic erythroblast | 1.71e-09 | 2 |
orthochromatic erythroblast | 1.71e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.77e-88 | 15 |
haemolymphatic fluid | 1.77e-88 | 15 |
organism substance | 1.77e-88 | 15 |
adult organism | 8.57e-14 | 114 |
hematopoietic system | 6.09e-13 | 98 |
blood island | 6.09e-13 | 98 |
cardiovascular system | 1.09e-11 | 109 |
hemolymphoid system | 1.09e-11 | 108 |
circulatory system | 2.35e-11 | 112 |