FFCP PHASE1:Hg19::chr16:449306..449319,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4833 | |EntrezGene=4833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7852 | |HGNC=7852 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-105bp_to_AF086133_5end | |association_with_transcript=-105bp_to_AF086133_5end | ||
|cluster_id=chr16:449306..449319,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_19_at_NME4_5end | |description=CAGE_peak_19_at_NME4_5end | ||
|id=chr16:449306..449319,+ | |id=chr16:449306..449319,+ | ||
|ontology_enrichment_celltype=CL:0000764!9.98e-16!2;CL:0000765!9.98e-16!2;CL:0000050!9.98e-16!2;CL:0000038!9.98e-16!2;CL:0000558!9.98e-16!2;CL:0000547!9.98e-16!2;CL:0000549!9.98e-16!2;CL:0000550!9.98e-16!2;CL:0000552!9.98e-16!2 | |ontology_enrichment_celltype=CL:0000764!9.98e-16!2;CL:0000765!9.98e-16!2;CL:0000050!9.98e-16!2;CL:0000038!9.98e-16!2;CL:0000558!9.98e-16!2;CL:0000547!9.98e-16!2;CL:0000549!9.98e-16!2;CL:0000550!9.98e-16!2;CL:0000552!9.98e-16!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.30e-37;2!CL:0000558;1.30e-37;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.30e-37,2;CL:0000765,1.30e-37,2;CL:0000050,1.30e-37,2;CL:0000038,1.30e-37,2;CL:0000558,1.30e-37,2;CL:0000547,1.30e-37,2;CL:0000549,1.30e-37,2;CL:0000550,1.30e-37,2;CL:0000552,1.30e-37,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:6193!3.57e-08!1;DOID:8552!3.83e-08!1 | |ontology_enrichment_disease=DOID:6193!3.57e-08!1;DOID:8552!3.83e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.88e-37!15;UBERON:0000179!2.88e-37!15;UBERON:0000463!2.88e-37!15;UBERON:0007023!6.86e-11!115;UBERON:0000996!2.17e-08!1 | |ontology_enrichment_uberon=UBERON:0000178!2.88e-37!15;UBERON:0000179!2.88e-37!15;UBERON:0000463!2.88e-37!15;UBERON:0007023!6.86e-11!115;UBERON:0000996!2.17e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.70e-95;15!UBERON:0000179;1.70e-95;15!UBERON:0000463;1.70e-95;15!UBERON:0002390;7.95e-41;32!UBERON:0002193;1.11e-22;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.70e-95,15;UBERON:0000179,1.70e-95,15;UBERON:0000463,1.70e-95,15;UBERON:0007023,1.73e-18,114;UBERON:0002390,3.90e-14,98;UBERON:0003061,3.90e-14,98;UBERON:0004535,8.72e-13,109;UBERON:0002193,8.72e-13,108;UBERON:0001009,1.99e-12,112 | |||
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|short_description=p19@NME4 | |short_description=p19@NME4 | ||
}} | }} |
Latest revision as of 16:37, 16 September 2015
Short description: | p19@NME4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_NME4_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -105bp_to_AF086133_5end |
EntrezGene: | NME4 |
HGNC: | 7852 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.30e-37 | 2 |
erythroblast | 1.30e-37 | 2 |
megakaryocyte-erythroid progenitor cell | 1.30e-37 | 2 |
erythroid progenitor cell | 1.30e-37 | 2 |
reticulocyte | 1.30e-37 | 2 |
proerythroblast | 1.30e-37 | 2 |
basophilic erythroblast | 1.30e-37 | 2 |
polychromatophilic erythroblast | 1.30e-37 | 2 |
orthochromatic erythroblast | 1.30e-37 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.70e-95 | 15 |
haemolymphatic fluid | 1.70e-95 | 15 |
organism substance | 1.70e-95 | 15 |
adult organism | 1.73e-18 | 114 |
hematopoietic system | 3.90e-14 | 98 |
blood island | 3.90e-14 | 98 |
cardiovascular system | 8.72e-13 | 109 |
hemolymphoid system | 8.72e-13 | 108 |
circulatory system | 1.99e-12 | 112 |