FFCP PHASE2:Hg19::chr12:118541803..118541847,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:54621 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:26078 |TSScla...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=54621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=26078 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8N0Z9 | ||
|association_with_transcript=0bp_to_ENST00000536905,NM_019086,uc001tws.2,uc001twt.2_5end | |association_with_transcript=0bp_to_ENST00000536905,NM_019086,uc001tws.2,uc001twt.2_5end | ||
|cluster_id=chr12:118541803..118541847,- | |cluster_id=chr12:118541803..118541847,- |
Latest revision as of 17:13, 16 September 2015
Short description: | p1@VSIG10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VSIG10_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 0bp_to_ENST00000536905, NM_019086, uc001tws.2, uc001twt.2_5end |
EntrezGene: | VSIG10 |
HGNC: | 26078 |
UniProt: | Q8N0Z9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@VSIG10 |
---|
0
50
100
150
200
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.21e-14 | 160 |
endoderm | 5.21e-14 | 160 |
presumptive endoderm | 5.21e-14 | 160 |
digestive system | 4.79e-13 | 145 |
digestive tract | 4.79e-13 | 145 |
primitive gut | 4.79e-13 | 145 |
subdivision of digestive tract | 4.38e-10 | 118 |
trunk region element | 6.19e-10 | 101 |
renal system | 7.76e-08 | 48 |
trunk | 9.88e-08 | 199 |
Showing 1 to 10 of 15 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.28e-20 | 106 |
cell type cancer | 1.61e-18 | 143 |
cancer | 2.39e-10 | 235 |
disease of cellular proliferation | 2.96e-10 | 239 |
Showing 1 to 4 of 4 entries