FFCP PHASE1:Hg19::chr12:11905335..11905342,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2120 | |EntrezGene=2120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3495 | |HGNC=3495 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-92bp_to_ENST00000545027_5end | |association_with_transcript=-92bp_to_ENST00000545027_5end | ||
|cluster_id=chr12:11905335..11905342,+ | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_28_at_ETV6_5end | |description=CAGE_peak_28_at_ETV6_5end | ||
|id=chr12:11905335..11905342,+ | |id=chr12:11905335..11905342,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.80e-29!42;CL:0000860!4.43e-27!45;CL:0002194!8.23e-22!63;CL:0000576!8.23e-22!63;CL:0000040!8.23e-22!63;CL:0000559!8.23e-22!63;CL:0002009!4.36e-21!65;CL:0000839!1.87e-19!70;CL:0000557!3.73e-19!71;CL:0000766!8.96e-18!76;CL:0002087!7.79e-17!119;CL:0000738!6.23e-14!140;CL:0002031!6.76e-14!124;CL:0000763!1.98e-11!112;CL:0000049!1.98e-11!112;CL:0002032!1.98e-11!165;CL:0000837!1.98e-11!165;CL:0000819!6.73e-11!1;CL:0000037!7.39e-11!172;CL:0000566!7.39e-11!172;CL:0000988!4.07e-10!182 | |ontology_enrichment_celltype=CL:0002057!3.80e-29!42;CL:0000860!4.43e-27!45;CL:0002194!8.23e-22!63;CL:0000576!8.23e-22!63;CL:0000040!8.23e-22!63;CL:0000559!8.23e-22!63;CL:0002009!4.36e-21!65;CL:0000839!1.87e-19!70;CL:0000557!3.73e-19!71;CL:0000766!8.96e-18!76;CL:0002087!7.79e-17!119;CL:0000738!6.23e-14!140;CL:0002031!6.76e-14!124;CL:0000763!1.98e-11!112;CL:0000049!1.98e-11!112;CL:0002032!1.98e-11!165;CL:0000837!1.98e-11!165;CL:0000819!6.73e-11!1;CL:0000037!7.39e-11!172;CL:0000566!7.39e-11!172;CL:0000988!4.07e-10!182 | ||
|ontology_enrichment_celltype_v019=CL:0000785;9.37e-99;1!CL:0000819;9.37e-99;1!CL:0000236;5.28e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,9.37e-99,1;CL:0000785,2.74e-50,2;CL:0000955,2.74e-50,2;CL:0000818,2.74e-50,2;CL:0000954,2.74e-50,2;CL:0000816,2.74e-50,2;CL:0000817,4.27e-34,3;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53;CL:0000236,1.86e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000954;2.74e-50;2 | |||
|ontology_enrichment_disease=DOID:0060073!6.73e-11!1;DOID:8675!6.73e-11!1;DOID:12603!7.40e-11!1 | |ontology_enrichment_disease=DOID:0060073!6.73e-11!1;DOID:8675!6.73e-11!1;DOID:12603!7.40e-11!1 | ||
|ontology_enrichment_disease_v019=DOID:0060073;9.37e-99;1!DOID:8675;9.37e-99;1!DOID:12603;2.55e-98;1!DOID:0060058;2.73e-11;10!DOID:2531;3.40e-07;51!DOID:0060083;3.40e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,9.37e-99,1;DOID:8675,9.37e-99,1;DOID:12603,2.55e-98,1;DOID:0060058,2.73e-11,10;DOID:2531,4.95e-09,51;DOID:0060083,4.95e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.43e-17!102;UBERON:0003061!2.43e-17!102;UBERON:0002371!8.61e-17!80;UBERON:0002193!1.38e-15!112;UBERON:0001474!1.73e-15!86;UBERON:0002405!4.05e-15!115;UBERON:0004765!6.78e-13!101;UBERON:0001434!6.78e-13!101;UBERON:0002370!4.55e-10!4;UBERON:0005058!4.55e-10!4;UBERON:0009113!4.55e-10!4;UBERON:0003295!4.55e-10!4;UBERON:0005562!4.55e-10!4;UBERON:0000974!9.71e-09!10;UBERON:0003081!4.90e-08!216;UBERON:0003351!5.42e-07!6;UBERON:0002204!5.57e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p28@ETV6 | |short_description=p28@ETV6 | ||
}} | }} |
Latest revision as of 17:55, 16 September 2015
Short description: | p28@ETV6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_ETV6_5end |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | -92bp_to_ENST00000545027_5end |
EntrezGene: | ETV6 |
HGNC: | 3495 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 9.37e-99 | 1 |
mature B cell | 2.74e-50 | 2 |
pre-B-II cell | 2.74e-50 | 2 |
transitional stage B cell | 2.74e-50 | 2 |
small pre-B-II cell | 2.74e-50 | 2 |
immature B cell | 2.74e-50 | 2 |
precursor B cell | 4.27e-34 | 3 |
lymphocyte | 9.74e-09 | 53 |
common lymphoid progenitor | 9.74e-09 | 53 |
B cell | 1.86e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 9.37e-99 | 1 |
lymphosarcoma | 9.37e-99 | 1 |
acute leukemia | 2.55e-98 | 1 |
lymphoma | 2.73e-11 | 10 |
hematologic cancer | 4.95e-09 | 51 |
immune system cancer | 4.95e-09 | 51 |