FFCP PHASE1:Hg19::chr2:28113217..28113265,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:28113217..28113265,-
|short_description=p1@RBKS
|description=CAGE_peak_1_at_RBKS_5end
|association_with_transcript=0bp_to_ENST00000444339,ENST00000449378,N...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64080 | |EntrezGene=64080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30325 | |HGNC=30325 | ||
|TSSclassifier=strong | |||
|UniProt=B4DV96,E7EQ18,Q9H477 | |UniProt=B4DV96,E7EQ18,Q9H477 | ||
|association_with_transcript=0bp_to_ENST00000444339,ENST00000449378,NM_022128,uc002rlo.1,uc010ezi.1,uc010ymg.1_5end | |||
|cluster_id=chr2:28113217..28113265,- | |||
|description=CAGE_peak_1_at_RBKS_5end | |||
|id=chr2:28113217..28113265,- | |||
|ontology_enrichment_celltype=CL:0000223!7.07e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.14e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.03e-09,106;DOID:0050687,8.30e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.68e-14!115;UBERON:0000481!1.58e-12!347;UBERON:0001007!1.12e-09!155;UBERON:0001555!1.12e-09!155;UBERON:0007026!1.12e-09!155;UBERON:0004921!1.41e-09!129;UBERON:0004185!1.41e-09!129;UBERON:0004119!5.09e-08!169;UBERON:0000925!5.09e-08!169;UBERON:0006595!5.09e-08!169;UBERON:0001041!1.79e-07!98;UBERON:0005177!6.79e-07!107;UBERON:0000077!7.79e-07!130;UBERON:0003104!9.87e-07!238;UBERON:0009142!9.87e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.34e-14,114;UBERON:0011216,3.65e-11,223;UBERON:0004921,3.04e-08,118;UBERON:0001007,3.58e-08,145;UBERON:0001555,3.58e-08,145;UBERON:0007026,3.58e-08,145 | |||
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| ||
|short_description=p1@RBKS | |||
}} | }} |
Latest revision as of 18:28, 16 September 2015
Short description: | p1@RBKS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RBKS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000444339, ENST00000449378, NM_022128, uc002rlo.1, uc010ezi.1, uc010ymg.1_5end |
EntrezGene: | RBKS |
HGNC: | 30325 |
UniProt: | B4DV96E7EQ18Q9H477 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.34e-14 | 114 |
organ system subdivision | 3.65e-11 | 223 |
subdivision of digestive tract | 3.04e-08 | 118 |
digestive system | 3.58e-08 | 145 |
digestive tract | 3.58e-08 | 145 |
primitive gut | 3.58e-08 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.03e-09 | 106 |
cell type cancer | 8.30e-07 | 143 |