FFCP PHASE1:Hg19::chr3:172144898..172144914,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:172144898..172144914,- to FFCP PHASE1:Hg19::chr3:172144898..172144914,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=31378 | |HGNC=31378 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000454901_5end | |||
|cluster_id=chr3:172144898..172144914,- | |||
|coexpression_cluster_id=C4169 | |||
|description=CAGE_peak_1_at_BZW1P1_5end | |||
|id=chr3:172144898..172144914,- | |||
|ontology_enrichment_celltype=CL:0000548!2.10e-16!679;CL:0000004!2.10e-16!679;CL:0000255!2.10e-16!679;CL:0000012!1.20e-15!682;CL:0000063!9.87e-12!578;CL:0000003!6.56e-11!722;CL:0000860!3.53e-10!45;CL:0002371!5.28e-10!591;CL:0000144!7.83e-10!625;CL:0000048!1.06e-08!430;CL:0002057!1.17e-08!42;CL:0000723!1.59e-08!436;CL:0000034!9.51e-08!444;CL:0000557!1.72e-07!71;CL:0002320!2.00e-07!365;CL:0000766!4.84e-07!76;CL:0000134!5.82e-07!358;CL:0002009!8.05e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.91e-14;33!CL:0002057;4.91e-14;33!CL:0000473;1.63e-08;39!CL:0000234;1.63e-08;39!CL:0000453;2.36e-08;5!CL:0000576;9.24e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.94e-13,42;CL:0002057,1.94e-13,42;CL:0000473,6.15e-11,48;CL:0000234,6.15e-11,48;CL:0002009,6.39e-09,61;CL:0000453,7.54e-09,5;CL:0000557,1.62e-08,67;CL:0000766,2.52e-08,72;CL:0002194,1.58e-07,59;CL:0000576,1.58e-07,59;CL:0000040,1.58e-07,59;CL:0000559,1.58e-07,59;CL:0000839,5.26e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.29e-07!448;UBERON:0004120!1.29e-07!448;UBERON:0006603!1.29e-07!448;UBERON:0004765!4.11e-07!101;UBERON:0001434!4.11e-07!101;UBERON:0001737!5.17e-07!9;UBERON:0002384!9.49e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.80e-14;9!UBERON:0001557;2.80e-14;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.45e-14,9;UBERON:0001557,1.09e-08,19;UBERON:0001434,1.57e-07,100;UBERON:0002371,9.41e-07,76 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0.704772020479856,0,0,0,0,0,1.56711376919903,0.245733936501509,0,0,0,2.22779435328084,0.662794751455832,0,0.602694528023977,0,0,0,0,0,0,0.273748850145768,0.376627918784408,1.52826811495903,0.985207073399349,0.944529375764151,0,0,0.928896739896456,0,0,0,0.0774672005803016,0.284338464974843,0.587200878669695,1.10799081706375,0.601633342410425,1.08505435357926,0,0.32389366601898,0,0.872389432677388,0.377875943688809,0.242584061187816,1.85943229524548,0.822335776043652,0.309706370895104,2.01384674625505,3.07392847834921,1.41889337933151,1.72372840368309,0.645484683583826,1.35426486594342,1.69418105588344,4.09359225086769,2.47195832889593,3.06083892370903,2.88836124368484,0.639337125799041,0,1.99463657621632,0.426224750532694,2.03146467040009,2.26954089876456,1.86846674698672,1.25624332628372,1.0429658368404,1.73751075764093,2.42159801053347,4.05105399586321,1.26584954976354,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0.167186495390678,0.32592226663359,0,0,0.557052284425868,0,0,0.270803863765016,0.768547918354051,0.260118695119756,0.328875809207352,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0,0,0,0,2.01606743224732,0.267440195783507,0.868946423296794,0,0,0.511450247374121,0,0.50133791063589,4.49024208778554,0,1.45990461090791,0.378139268656271,0.443458794925128,0.43917392846563,0.130979075497713,0,0,0.324547393654683,0.696518949197069,0.797747763113191,0,0.571994910780128,0,1.78886166630035,3.4409383804245,0,0.56530794192401,1.25849830862972,1.6507082516404,1.25396979922086,2.06733407335463,0.71153252537342,0,0,1.52054421143703,0.24406205754817,0,0,0.803697554556718,0.44905874525234,0.450445921933289,0,0,0.916008719652036,0,3.87780264148325,0,1.49091585508596,2.02608818663328,1.19168262731897,0.286836620748814,2.4826786753885,0.560677600142307,0,0.74000264525148,0.933633106199299,0.808264032418128,0.490385709340376,0,0.576175924479999,0,2.18512053781224,0,3.73621701379503,0.704606991862589,0.323745888736263,0.140450806702248,2.85815839756851,0.368502951935304,1.54988671763648,0,0.247266929278557,0,0,1.0100166837244,0.875829639103749,1.93944880838928,0,0.919463387397059,1.95309476578576,2.38207584636044,0,0.213557388818567,0,0,0.515262646192195,0.515281080091258,0.18611685633159,0.843881661206331,0.194874010322397,0,0.368199594569197,0.161646056818812,0,0.10075209822764,0.339121184620975,0.57978255948989,0.545492241181669,2.00763216772303,0.121973706129595,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0.721879481669586,2.72105640091641,2.19160097101532,2.41011029883482,4.08087699109858,2.17879444092406,2.37270619111097,2.69662616320329,2.15843611637881,1.15424147083917,0,0,0,0,1.26755034821831,0,0,0,0.614942192715568,2.05881372358231,0.439001141634502,0,0.502644862058154,0.740707561268237,0.325808305310325,0,0,0,1.40890433082986,0.721832238805369,0.925971025153221,2.47330397904978,0,0,0,0.936017060556951,0.148631162288728,0,1.00789276919316,0.283550194484773,3.67189943081678,0.871901815541886,0.383382679165211,7.8826118063351,0.968532774145487,0.621984346622316,0.432359860250884,0.50496973370552,0.253991577168676,0,0,0,0,0.300343057843917,0.285826432630578,0,0,1.0267360014933,0.387815147273333,0,1.690605505112,0.26593811658487,0,0.257207374262142,0,0,0.428933980974443,0,0,1.30294473717494,0.710783897485092,0,0.301439377059586,0.871533458600294,1.19967589418468,0,0.502257091432126,0,0.479249710983165,0,0,1.59259437334337,2.05476322550383,1.25342674267927,0.112085143993527,0.985153801009636,1.94064817373566,0.898401253958239,0,0,0,0.335032530668698,0,1.49801404789436,0,2.48649308061621,0.736148950314839,1.00034104211935,0.542530047399471,0.415941723061614,1.24900292158013,1.26161932027148,0.819989904948992,0,0,1.03473071292505,1.32845119707087,0.553107505625109,1.91143951829782,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0.30239029332968,0.496215615637554,0.153461973288062,0.841980283299221,0.512556597022804,1.02341449813341,0.965123526861645,0,0.925258162815933,1.77561725313127,0.9033987161519,0,0.464841513839837,0.362578348774867,1.20303882181971,1.38121483403844,2.06666006696292,1.27463817604702,0.786746489756545,0,0.308061348417659,0,0,1.26661954671451,0,0,1.0795795805107,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.165018999841176,0,0.650060246036521,3.21367859688319,0.386682873168488,0.154048617114644,0,0.275673144969061,0.322260734604821,0.145016693914229,0.340906509664404,0.178064071293475,2.31398881505369,0.768760269460425,0.765676274967505,0.809262246844399,0,1.88887408098384,2.7881490806424,0.616067160352178,0,0,0.55597265731176,1.14499909393593,0,0,0.190630193923825,0,0,1.59101623962968,0,0.179872457583315,0.274537029736055,0.235624804691373,0.404364963146632,3.17020642346017,0,0,0.731140468893853,0,0.682499557039929,0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| ||
|short_description=p1@BZW1P1 | |||
}} | }} |
Latest revision as of 18:31, 16 September 2015
Short description: | p1@BZW1P1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BZW1P1_5end |
Coexpression cluster: | C4169_Mast_CD14_large_migratory_Synoviocyte_immature_Mammary |
Association with transcript: | -19bp_to_ENST00000454901_5end |
EntrezGene: | NA |
HGNC: | 31378 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.94e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.94e-13 | 42 |
defensive cell | 6.15e-11 | 48 |
phagocyte | 6.15e-11 | 48 |
macrophage dendritic cell progenitor | 6.39e-09 | 61 |
Langerhans cell | 7.54e-09 | 5 |
granulocyte monocyte progenitor cell | 1.62e-08 | 67 |
myeloid leukocyte | 2.52e-08 | 72 |
monopoietic cell | 1.58e-07 | 59 |
monocyte | 1.58e-07 | 59 |
monoblast | 1.58e-07 | 59 |
promonocyte | 1.58e-07 | 59 |
myeloid lineage restricted progenitor cell | 5.26e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.45e-14 | 9 |
upper respiratory tract | 1.09e-08 | 19 |
skeletal system | 1.57e-07 | 100 |
bone marrow | 9.41e-07 | 76 |