FFCP PHASE2:Hg19::chr1:24239954..24239975,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:1269 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:2160 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=2160 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P34972 | ||
|association_with_transcript=-102bp_to_ENST00000374472_5end | |association_with_transcript=-102bp_to_ENST00000374472_5end | ||
|cluster_id=chr1:24239954..24239975,- | |cluster_id=chr1:24239954..24239975,- |
Latest revision as of 18:49, 16 September 2015
Short description: | p4@CNR2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CNR2_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -102bp_to_ENST00000374472_5end |
EntrezGene: | CNR2 |
HGNC: | 2160 |
UniProt: | P34972 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@CNR2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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germ line cell | 9.97e-46 | 7 |
germ cell | 9.97e-46 | 7 |
innate effector T cell | 2.30e-21 | 1 |
immature NK T cell | 2.30e-21 | 1 |
effector T cell | 2.30e-21 | 1 |
mature NK T cell | 2.30e-21 | 1 |
immature NK T cell stage IV | 2.30e-21 | 1 |
immature NK T cell stage I | 2.30e-21 | 1 |
immature NK T cell stage II | 2.30e-21 | 1 |
immature NK T cell stage III | 2.30e-21 | 1 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
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testis | 4.30e-40 | 8 |
male reproductive organ | 2.54e-29 | 11 |
gonad | 1.36e-15 | 21 |
indifferent external genitalia | 1.36e-15 | 21 |
indifferent gonad | 1.36e-15 | 21 |
gonad primordium | 1.36e-15 | 21 |
external genitalia | 6.67e-15 | 22 |
male organism | 6.67e-15 | 22 |
male reproductive system | 6.67e-15 | 22 |
body cavity | 2.65e-07 | 46 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
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genetic disease | 9.43e-21 | 1 |
monogenic disease | 9.43e-21 | 1 |
xeroderma pigmentosum | 9.43e-21 | 1 |
germ cell and embryonal cancer | 6.67e-15 | 22 |
germ cell cancer | 6.67e-15 | 22 |
Showing 1 to 5 of 5 entries