FFCP PHASE1:Hg19::chr19:19162934..19162946,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93436 | |EntrezGene=93436 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25049 | |HGNC=25049 | ||
|TSSclassifier=strong | |||
|UniProt=Q68CW5 | |UniProt=Q68CW5 | ||
|association_with_transcript=446bp_to_CR749678_5end | |association_with_transcript=446bp_to_CR749678_5end | ||
|cluster_id=chr19:19162934..19162946,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_12_at_ARMC6_5end | |description=CAGE_peak_12_at_ARMC6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000313!3.58e-08!1 | |ontology_enrichment_celltype=CL:0000313!3.58e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.79e-22;12 | |ontology_enrichment_celltype_v019=CL:0000182;6.79e-22;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.79e-22,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2513!2.71e-08!1;DOID:2152!3.58e-08!1;DOID:3111!4.40e-08!1;DOID:3603!4.40e-08!1 | |ontology_enrichment_disease=DOID:2513!2.71e-08!1;DOID:2152!3.58e-08!1;DOID:3111!4.40e-08!1;DOID:3603!4.40e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004911!3.58e-08!1 | |ontology_enrichment_uberon=UBERON:0004911!3.58e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.60e-24;19!UBERON:0006925;2.60e-24;19!UBERON:0002423;1.25e-18;25!UBERON:0002365;1.27e-15;31!UBERON:0002330;1.27e-15;31!UBERON:0002368;1.31e-12;33!UBERON:0000949;1.32e-10;43!UBERON:0005172;7.25e-08;52!UBERON:0005173;7.25e-08;52 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.60e-24;19!UBERON:0006925;2.60e-24;19!UBERON:0002423;1.25e-18;25!UBERON:0002365;1.27e-15;31!UBERON:0002330;1.27e-15;31!UBERON:0002368;1.31e-12;33!UBERON:0000949;1.32e-10;43!UBERON:0005172;7.25e-08;52!UBERON:0005173;7.25e-08;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.60e-24,19;UBERON:0006925,2.60e-24,19;UBERON:0008836,2.60e-24,19;UBERON:0008835,4.38e-21,22;UBERON:0003894,4.38e-21,22;UBERON:0009854,3.39e-20,23;UBERON:0007499,1.25e-18,25;UBERON:0009497,1.25e-18,25;UBERON:0000015,1.25e-18,25;UBERON:0002423,1.25e-18,25;UBERON:0006235,1.25e-18,25;UBERON:0004161,1.25e-18,25;UBERON:0009856,6.16e-18,26;UBERON:0002365,3.88e-15,31;UBERON:0002330,3.88e-15,31;UBERON:0002368,1.80e-13,35;UBERON:0000949,1.37e-10,45;UBERON:0003929,6.69e-09,54;UBERON:0005172,6.69e-09,54;UBERON:0005173,6.69e-09,54;UBERON:0002530,3.49e-08,59;UBERON:0002417,4.71e-08,60;UBERON:0000916,4.71e-08,60 | |||
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|short_description=p12@ARMC6 | |short_description=p12@ARMC6 | ||
}} | }} |
Latest revision as of 19:14, 16 September 2015
Short description: | p12@ARMC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ARMC6_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 446bp_to_CR749678_5end |
EntrezGene: | ARMC6 |
HGNC: | 25049 |
UniProt: | Q68CW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.79e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.60e-24 | 19 |
digestive gland | 2.60e-24 | 19 |
liver bud | 2.60e-24 | 19 |
hepatic diverticulum | 4.38e-21 | 22 |
liver primordium | 4.38e-21 | 22 |
digestive tract diverticulum | 3.39e-20 | 23 |
epithelial sac | 1.25e-18 | 25 |
epithelium of foregut-midgut junction | 1.25e-18 | 25 |
anatomical boundary | 1.25e-18 | 25 |
hepatobiliary system | 1.25e-18 | 25 |
foregut-midgut junction | 1.25e-18 | 25 |
septum transversum | 1.25e-18 | 25 |
sac | 6.16e-18 | 26 |
exocrine gland | 3.88e-15 | 31 |
exocrine system | 3.88e-15 | 31 |
endocrine gland | 1.80e-13 | 35 |
endocrine system | 1.37e-10 | 45 |
gut epithelium | 6.69e-09 | 54 |
abdomen element | 6.69e-09 | 54 |
abdominal segment element | 6.69e-09 | 54 |
gland | 3.49e-08 | 59 |
abdominal segment of trunk | 4.71e-08 | 60 |
abdomen | 4.71e-08 | 60 |