FFCP PHASE1:Hg19::chr16:50430783..50430797,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:50430783..50430797,- | |||
|description=CAGE_peak_at_chr16:50430783..50430797,- | |description=CAGE_peak_at_chr16:50430783..50430797,- | ||
|id=chr16:50430783..50430797,- | |id=chr16:50430783..50430797,- | ||
|ontology_enrichment_celltype=CL:0000066!8.67e-23!254;CL:0002076!8.26e-16!43;CL:0002159!3.98e-14!13;CL:0000223!1.37e-11!59;CL:0002077!9.14e-10!33;CL:0002621!3.39e-08!3;CL:0000076!1.11e-07!62;CL:0002166!1.23e-07!3;CL:0000240!7.35e-07!6;CL:0000311!7.35e-07!6;CL:0000079!7.35e-07!6;CL:0000237!7.35e-07!6;CL:0000036!7.35e-07!6;CL:0000357!7.35e-07!6;CL:0000114!7.35e-07!6 | |ontology_enrichment_celltype=CL:0000066!8.67e-23!254;CL:0002076!8.26e-16!43;CL:0002159!3.98e-14!13;CL:0000223!1.37e-11!59;CL:0002077!9.14e-10!33;CL:0002621!3.39e-08!3;CL:0000076!1.11e-07!62;CL:0002166!1.23e-07!3;CL:0000240!7.35e-07!6;CL:0000311!7.35e-07!6;CL:0000079!7.35e-07!6;CL:0000237!7.35e-07!6;CL:0000036!7.35e-07!6;CL:0000357!7.35e-07!6;CL:0000114!7.35e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000575;2.16e-12;2!CL:0002537;1.56e-11;5!CL:0002159;7.44e-10;14!CL:0000349;1.06e-07;19!CL:0000082;2.40e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,2.88e-12,2;CL:0000066,3.85e-12,253;CL:0002537,1.71e-11,5;CL:0000076,1.26e-10,63;CL:0002159,8.29e-10,14;CL:0000349,1.08e-07,19;CL:0000082,2.49e-07,19;CL:0002077,2.77e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.50e-07;1 | |||
|ontology_enrichment_disease=DOID:1749!1.18e-13!14;DOID:305!2.81e-12!106;DOID:0050687!1.11e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.27e-19;14!DOID:0050615;7.63e-09;16!DOID:0050619;1.91e-07;1!DOID:1357;1.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.44e-19,14;DOID:305,5.12e-12,106;DOID:0050615,8.24e-09,16;DOID:0050687,5.26e-08,143;DOID:0050619,1.86e-07,1;DOID:1357,1.86e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!8.62e-14!14;UBERON:0000158!8.62e-14!14;UBERON:0000305!1.38e-09!7;UBERON:0000478!4.53e-09!24;UBERON:0001004!1.09e-08!72;UBERON:0000344!1.25e-08!12;UBERON:0004119!1.49e-08!169;UBERON:0000925!1.49e-08!169;UBERON:0006595!1.49e-08!169;UBERON:0004871!2.51e-08!8;UBERON:0001949!3.39e-08!3;UBERON:0000995!4.62e-08!21;UBERON:0003729!7.21e-08!5;UBERON:0005795!1.29e-07!22;UBERON:0003975!1.29e-07!22;UBERON:0004923!2.70e-07!57;UBERON:0000161!2.84e-07!35;UBERON:0003100!3.12e-07!41;UBERON:0005156!7.30e-07!59;UBERON:0000990!7.30e-07!59 | |ontology_enrichment_uberon=UBERON:0005631!8.62e-14!14;UBERON:0000158!8.62e-14!14;UBERON:0000305!1.38e-09!7;UBERON:0000478!4.53e-09!24;UBERON:0001004!1.09e-08!72;UBERON:0000344!1.25e-08!12;UBERON:0004119!1.49e-08!169;UBERON:0000925!1.49e-08!169;UBERON:0006595!1.49e-08!169;UBERON:0004871!2.51e-08!8;UBERON:0001949!3.39e-08!3;UBERON:0000995!4.62e-08!21;UBERON:0003729!7.21e-08!5;UBERON:0005795!1.29e-07!22;UBERON:0003975!1.29e-07!22;UBERON:0004923!2.70e-07!57;UBERON:0000161!2.84e-07!35;UBERON:0003100!3.12e-07!41;UBERON:0005156!7.30e-07!59;UBERON:0000990!7.30e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;7.21e-10;10!UBERON:0000158;7.21e-10;10!UBERON:0004807;8.46e-09;22!UBERON:0000478;2.01e-08;24!UBERON:0000305;2.31e-08;7!UBERON:0001764;1.91e-07;1!UBERON:0001825;1.91e-07;1!UBERON:0004802;2.40e-07;19!UBERON:0000115;2.40e-07;19!UBERON:0000997;3.50e-07;1!UBERON:0005056;3.50e-07;1!UBERON:0004176;3.50e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.53e-10,14;UBERON:0000158,1.53e-10,14;UBERON:0000478,2.09e-08,24;UBERON:0000305,2.46e-08,7;UBERON:0001764,1.86e-07,1;UBERON:0001825,1.86e-07,1;UBERON:0004871,2.42e-07,8;UBERON:0004802,2.49e-07,19;UBERON:0000115,2.49e-07,19;UBERON:0000997,3.60e-07,1;UBERON:0005056,3.60e-07,1;UBERON:0004807,9.58e-07,28 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5500670180478,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.09098448236334,0.860413786167011,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,1.3068766413512,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42502057157008,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,4.69613043573071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.661139661443912,0.576570202095319,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,0,0,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,13.3696911453106,2.07875276582847,17.5081600196562,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,6.08671993897071,0,0,0,0,0,0,0,0,0,0,0,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,1.81250867562184,0.384751292518985,0,0,0,0,3.82801391678303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,2.35181753794506,3.4823682632161,0,0.171986032471617,0,0,0,0.484945082442097,0,0.677942222341597,0,0,0,1.17330829640882,0,0,0,0,0,0,1.29649318189335,0,3.29971648463514,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81926008926669,0,0,0,0,0,0,1.91502377331055,0,0,0,0,8.48092119751265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,8.11301144772778,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76665893301846,0.11796972334774,0.183428598521679,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0,11.8761782674444,0,0,0,0,0,0,0,0,2.03302947670128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2339512797551,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.61193297845189,0,0.735159196278759,0,0,0,0,0,0.852935927603924,0,0,0,0,0,0,0.870866991587845,0,0.336760265072938,0.0717222053926763,0,0.0814032686109745,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr16:50430783..50430797,- | |short_description=p@chr16:50430783..50430797,- | ||
}} | }} |
Latest revision as of 20:33, 16 September 2015
Short description: | p@chr16:50430783..50430797, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50430783..50430797, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 2.88e-12 | 2 |
epithelial cell | 3.85e-12 | 253 |
amnion mesenchymal stem cell | 1.71e-11 | 5 |
squamous epithelial cell | 1.26e-10 | 63 |
general ecto-epithelial cell | 8.29e-10 | 14 |
extraembryonic cell | 1.08e-07 | 19 |
epithelial cell of lung | 2.49e-07 | 19 |
ecto-epithelial cell | 2.77e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.53e-10 | 14 |
membranous layer | 1.53e-10 | 14 |
extraembryonic structure | 2.09e-08 | 24 |
amnion | 2.46e-08 | 7 |
maxillary sinus | 1.86e-07 | 1 |
paranasal sinus | 1.86e-07 | 1 |
somatic layer of lateral plate mesoderm | 2.42e-07 | 8 |
respiratory tract epithelium | 2.49e-07 | 19 |
lung epithelium | 2.49e-07 | 19 |
mammalian vulva | 3.60e-07 | 1 |
external female genitalia | 3.60e-07 | 1 |
respiratory system epithelium | 9.58e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.44e-19 | 14 |
carcinoma | 5.12e-12 | 106 |
respiratory system cancer | 8.24e-09 | 16 |
cell type cancer | 5.26e-08 | 143 |
paranasal sinus cancer | 1.86e-07 | 1 |
maxillary sinus cancer | 1.86e-07 | 1 |