FFCP PHASE1:Hg19::chr2:29341016..29341031,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79745 | |EntrezGene=79745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26108 | |HGNC=26108 | ||
|TSSclassifier=strong | |||
|UniProt=E7EW06 | |UniProt=E7EW06 | ||
|association_with_transcript=-29bp_to_ENST00000449202_5end | |association_with_transcript=-29bp_to_ENST00000449202_5end | ||
|cluster_id=chr2:29341016..29341031,+ | |||
|coexpression_cluster_id=C4218 | |||
|description=CAGE_peak_17_at_CLIP4_5end | |description=CAGE_peak_17_at_CLIP4_5end | ||
|id=chr2:29341016..29341031,+ | |id=chr2:29341016..29341031,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.38e-26!254;CL:0002076!3.01e-11!43;CL:0000223!1.08e-09!59;CL:0000076!1.57e-08!62;CL:0000077!2.77e-07!19 | |ontology_enrichment_celltype=CL:0000066!2.38e-26!254;CL:0002076!3.01e-11!43;CL:0000223!1.08e-09!59;CL:0000076!1.57e-08!62;CL:0000077!2.77e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002581;5.37e-13;1!CL:0000313;5.37e-13;1!CL:0000159;3.92e-07;2!CL:0002262;3.92e-07;2!CL:1000398;3.92e-07;2!CL:0000076;7.48e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,4.23e-13,1;CL:0000313,9.73e-13,1;CL:0000076,4.59e-11,63;CL:0000066,1.76e-08,253;CL:0002262,3.70e-07,2;CL:1000398,3.70e-07,2;CL:0000159,5.28e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.91e-18!106;DOID:0050687!4.72e-16!143;DOID:14566!3.67e-12!239;DOID:162!1.98e-11!235;DOID:1749!7.33e-11!14;DOID:299!2.24e-08!25 | |ontology_enrichment_disease=DOID:305!2.91e-18!106;DOID:0050687!4.72e-16!143;DOID:14566!3.67e-12!239;DOID:162!1.98e-11!235;DOID:1749!7.33e-11!14;DOID:299!2.24e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;8.81e-14;14!DOID:2152;5.37e-13;1!DOID:1324;1.04e-07;15!DOID:4468;2.21e-07;2!DOID:0050615;2.94e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.12e-14,14;DOID:2152,9.73e-13,1;DOID:305,7.05e-10,106;DOID:0050687,1.54e-08,143;DOID:1324,1.12e-07,15;DOID:4468,2.28e-07,2;DOID:0050615,3.14e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0007625!6.38e-11!11;UBERON:0000076!6.41e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.37e-13;1!UBERON:0001281;3.92e-07;2!UBERON:0003497;3.92e-07;2!UBERON:0003909;3.92e-07;2!UBERON:0003835;3.92e-07;2!UBERON:0004909;3.92e-07;2!UBERON:0005406;3.92e-07;2!UBERON:0005911;5.37e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,9.73e-13,1;UBERON:0005406,3.48e-07,2;UBERON:0001281,3.70e-07,2;UBERON:0003497,3.70e-07,2;UBERON:0003909,3.70e-07,2;UBERON:0003835,3.70e-07,2;UBERON:0004909,5.28e-07,2 | |||
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| ||
|short_description=p17@CLIP4 | |short_description=p17@CLIP4 | ||
}} | }} |
Latest revision as of 20:38, 16 September 2015
Short description: | p17@CLIP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CLIP4_5end |
Coexpression cluster: | C4218_giant_transitionalcell_clear_large_squamous_mesothelioma_serous |
Association with transcript: | -29bp_to_ENST00000449202_5end |
EntrezGene: | CLIP4 |
HGNC: | 26108 |
UniProt: | E7EW06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 4.23e-13 | 1 |
serous secreting cell | 9.73e-13 | 1 |
squamous epithelial cell | 4.59e-11 | 63 |
epithelial cell | 1.76e-08 | 253 |
endothelial cell of sinusoid | 3.70e-07 | 2 |
endothelial cell of hepatic sinusoid | 3.70e-07 | 2 |
seromucus secreting cell | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 9.73e-13 | 1 |
perirenal fat | 3.48e-07 | 2 |
hepatic sinusoid | 3.70e-07 | 2 |
abdomen blood vessel | 3.70e-07 | 2 |
sinusoid | 3.70e-07 | 2 |
abdominal segment blood vessel | 3.70e-07 | 2 |
epithelium of gonad | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.12e-14 | 14 |
ovary epithelial cancer | 9.73e-13 | 1 |
carcinoma | 7.05e-10 | 106 |
cell type cancer | 1.54e-08 | 143 |
lung cancer | 1.12e-07 | 15 |
clear cell adenocarcinoma | 2.28e-07 | 2 |
respiratory system cancer | 3.14e-07 | 16 |