FFCP PHASE1:Hg19::chr15:101417973..101417981,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=220 | |EntrezGene=220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=409 | |HGNC=409 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=54bp_to_ENST00000561338_5end | |association_with_transcript=54bp_to_ENST00000561338_5end | ||
|cluster_id=chr15:101417973..101417981,+ | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_10_at_ALDH1A3_5end | |description=CAGE_peak_10_at_ALDH1A3_5end | ||
|id=chr15:101417973..101417981,+ | |id=chr15:101417973..101417981,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.85e-25!43;CL:0000223!2.51e-20!59;CL:0000066!1.30e-18!254;CL:0002202!3.50e-15!9;CL:0002632!3.50e-15!9;CL:0002368!8.01e-15!13;CL:0002251!4.66e-12!21;CL:0000076!2.88e-10!62;CL:0002328!1.76e-08!3;CL:0000068!3.41e-08!3;CL:0000069!3.41e-08!3;CL:0000307!3.41e-08!3;CL:0000377!3.41e-08!3;CL:0002231!5.64e-08!3;CL:1001319!4.18e-07!1;CL:1000600!4.18e-07!1 | |ontology_enrichment_celltype=CL:0002076!1.85e-25!43;CL:0000223!2.51e-20!59;CL:0000066!1.30e-18!254;CL:0002202!3.50e-15!9;CL:0002632!3.50e-15!9;CL:0002368!8.01e-15!13;CL:0002251!4.66e-12!21;CL:0000076!2.88e-10!62;CL:0002328!1.76e-08!3;CL:0000068!3.41e-08!3;CL:0000069!3.41e-08!3;CL:0000307!3.41e-08!3;CL:0000377!3.41e-08!3;CL:0002231!5.64e-08!3;CL:1001319!4.18e-07!1;CL:1000600!4.18e-07!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.56e-37!14;DOID:305!3.07e-18!106;DOID:0050687!9.98e-14!143;DOID:4468!3.35e-12!2;DOID:3111!5.26e-07!1;DOID:3603!5.26e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4468;5.04e-34;2!DOID:1749;6.48e-20;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,5.04e-34,2;DOID:1749,6.48e-20,14 | |||
|ontology_enrichment_uberon=UBERON:0003343!3.51e-22!4;UBERON:0004785!3.51e-22!4;UBERON:0003729!8.69e-18!5;UBERON:0000344!3.66e-16!12;UBERON:0007196!1.12e-09!14;UBERON:0001558!1.12e-09!14;UBERON:0000974!5.87e-09!10;UBERON:0000161!9.28e-09!35;UBERON:0000464!1.04e-08!104;UBERON:0001004!1.29e-08!72;UBERON:0004119!1.50e-08!169;UBERON:0000925!1.50e-08!169;UBERON:0006595!1.50e-08!169;UBERON:0001007!1.53e-08!155;UBERON:0001555!1.53e-08!155;UBERON:0007026!1.53e-08!155;UBERON:0004815!1.76e-08!3;UBERON:0002031!1.76e-08!3;UBERON:0000466!9.63e-08!126;UBERON:0005178!3.64e-07!34;UBERON:0002224!3.64e-07!34;UBERON:0004645!4.18e-07!1;UBERON:0001256!4.18e-07!1;UBERON:0001259!4.18e-07!1;UBERON:0005181!6.19e-07!35;UBERON:0001301!7.39e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.03e-17;4!UBERON:0004785;1.03e-17;4!UBERON:0000974;2.74e-12;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.03e-17,4;UBERON:0004785,1.03e-17,4;UBERON:0000974,6.56e-08,10 | |||
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|short_description=p10@ALDH1A3 | |short_description=p10@ALDH1A3 | ||
}} | }} |
Latest revision as of 22:12, 16 September 2015
Short description: | p10@ALDH1A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ALDH1A3_5end |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | 54bp_to_ENST00000561338_5end |
EntrezGene: | ALDH1A3 |
HGNC: | 409 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.03e-17 | 4 |
respiratory system mucosa | 1.03e-17 | 4 |
neck | 6.56e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 5.04e-34 | 2 |
squamous cell carcinoma | 6.48e-20 | 14 |