FFCP PHASE1:Hg19::chr1:150521876..150521901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54507 | |EntrezGene=54507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19706 | |HGNC=19706 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UY14,E7EUU5,Q8WYY2,Q9UFG7 | |UniProt=Q6UY14,E7EUU5,Q8WYY2,Q9UFG7 | ||
|association_with_transcript=0bp_to_ENST00000271643,ENST00000369041,ENST00000407995,ENST00000483335,ENST00000538795,NM_019032,NM_025008,uc001euw.2,uc001eux.2,uc009wlv.1_5end | |association_with_transcript=0bp_to_ENST00000271643,ENST00000369041,ENST00000407995,ENST00000483335,ENST00000538795,NM_019032,NM_025008,uc001euw.2,uc001eux.2,uc009wlv.1_5end | ||
|cluster_id=chr1:150521876..150521901,+ | |||
|description=CAGE_peak_1_at_ADAMTSL4_5end | |description=CAGE_peak_1_at_ADAMTSL4_5end | ||
|id=chr1:150521876..150521901,+ | |id=chr1:150521876..150521901,+ | ||
|ontology_enrichment_celltype=CL:0000057!4.84e-07!75;CL:0002194!6.22e-07!63;CL:0000576!6.22e-07!63;CL:0000040!6.22e-07!63;CL:0000559!6.22e-07!63 | |ontology_enrichment_celltype=CL:0000057!4.84e-07!75;CL:0002194!6.22e-07!63;CL:0000576!6.22e-07!63;CL:0000040!6.22e-07!63;CL:0000559!6.22e-07!63 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.90e-07,59;CL:0000576,1.90e-07,59;CL:0000040,1.90e-07,59;CL:0000559,1.90e-07,59;CL:0000057,2.72e-07,76;CL:0000473,3.13e-07,48;CL:0000234,3.13e-07,48;CL:0000766,4.25e-07,72;CL:0000860,9.70e-07,42;CL:0002057,9.70e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.16e-16!448;UBERON:0004120!1.16e-16!448;UBERON:0006603!1.16e-16!448;UBERON:0000468!1.06e-13!659;UBERON:0000062!2.50e-13!511;UBERON:0000467!3.14e-12!625;UBERON:0000480!6.42e-12!626;UBERON:0004119!1.05e-08!169;UBERON:0000925!1.05e-08!169;UBERON:0006595!1.05e-08!169;UBERON:0000479!1.25e-08!787;UBERON:0003102!1.75e-08!95;UBERON:0000922!2.13e-08!612;UBERON:0002204!2.71e-08!167;UBERON:0003104!4.18e-08!238;UBERON:0009142!4.18e-08!238;UBERON:0002050!5.11e-08!605;UBERON:0005423!5.11e-08!605;UBERON:0000923!8.70e-08!604;UBERON:0005291!8.70e-08!604;UBERON:0006598!8.70e-08!604;UBERON:0002532!8.70e-08!604;UBERON:0001007!6.54e-07!155;UBERON:0001555!6.54e-07!155;UBERON:0007026!6.54e-07!155 | |ontology_enrichment_uberon=UBERON:0000926!1.16e-16!448;UBERON:0004120!1.16e-16!448;UBERON:0006603!1.16e-16!448;UBERON:0000468!1.06e-13!659;UBERON:0000062!2.50e-13!511;UBERON:0000467!3.14e-12!625;UBERON:0000480!6.42e-12!626;UBERON:0004119!1.05e-08!169;UBERON:0000925!1.05e-08!169;UBERON:0006595!1.05e-08!169;UBERON:0000479!1.25e-08!787;UBERON:0003102!1.75e-08!95;UBERON:0000922!2.13e-08!612;UBERON:0002204!2.71e-08!167;UBERON:0003104!4.18e-08!238;UBERON:0009142!4.18e-08!238;UBERON:0002050!5.11e-08!605;UBERON:0005423!5.11e-08!605;UBERON:0000923!8.70e-08!604;UBERON:0005291!8.70e-08!604;UBERON:0006598!8.70e-08!604;UBERON:0002532!8.70e-08!604;UBERON:0001007!6.54e-07!155;UBERON:0001555!6.54e-07!155;UBERON:0007026!6.54e-07!155 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.73e-09,167;UBERON:0003102,2.35e-08,99;UBERON:0004119,2.50e-08,160;UBERON:0000925,2.50e-08,160;UBERON:0006595,2.50e-08,160;UBERON:0000479,1.10e-07,773;UBERON:0004923,2.06e-07,66;UBERON:0000926,3.36e-07,315;UBERON:0004120,3.36e-07,315;UBERON:0006603,3.36e-07,315 | |||
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| ||
|short_description=p1@ADAMTSL4 | |short_description=p1@ADAMTSL4 | ||
}} | }} |
Latest revision as of 22:21, 16 September 2015
Short description: | p1@ADAMTSL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAMTSL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000271643, ENST00000369041, ENST00000407995, ENST00000483335, ENST00000538795, NM_019032, NM_025008, uc001euw.2, uc001eux.2, uc009wlv.1_5end |
EntrezGene: | ADAMTSL4 |
HGNC: | 19706 |
UniProt: | Q6UY14E7EUU5Q8WYY2Q9UFG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.90e-07 | 59 |
monocyte | 1.90e-07 | 59 |
monoblast | 1.90e-07 | 59 |
promonocyte | 1.90e-07 | 59 |
fibroblast | 2.72e-07 | 76 |
defensive cell | 3.13e-07 | 48 |
phagocyte | 3.13e-07 | 48 |
myeloid leukocyte | 4.25e-07 | 72 |
classical monocyte | 9.70e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.70e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.73e-09 | 167 |
surface structure | 2.35e-08 | 99 |
endoderm-derived structure | 2.50e-08 | 160 |
endoderm | 2.50e-08 | 160 |
presumptive endoderm | 2.50e-08 | 160 |
tissue | 1.10e-07 | 773 |
organ component layer | 2.06e-07 | 66 |
mesoderm | 3.36e-07 | 315 |
mesoderm-derived structure | 3.36e-07 | 315 |
presumptive mesoderm | 3.36e-07 | 315 |