FFCP PHASE1:Hg19::chr11:16629182..16629201,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:16629182..16629201,-
|short_description=p10@SOX6
|description=CAGE_peak_10_at_SOX6_5end
|association_with_transcript=72bp_to_ENST00000525835_5end
|Entrez...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55553 | |EntrezGene=55553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16421 | |HGNC=16421 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=72bp_to_ENST00000525835_5end | |||
|cluster_id=chr11:16629182..16629201,- | |||
|description=CAGE_peak_10_at_SOX6_5end | |||
|id=chr11:16629182..16629201,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;4.61e-14;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;9.00e-08;4!UBERON:0007284;9.00e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.43e-33!115;UBERON:0001049!1.49e-29!57;UBERON:0005068!1.49e-29!57;UBERON:0006241!1.49e-29!57;UBERON:0007135!1.49e-29!57;UBERON:0001017!1.83e-29!82;UBERON:0005743!2.08e-28!86;UBERON:0002346!1.33e-27!90;UBERON:0003080!2.08e-26!42;UBERON:0002780!2.44e-25!41;UBERON:0001890!2.44e-25!41;UBERON:0006240!2.44e-25!41;UBERON:0000073!4.33e-25!94;UBERON:0001016!4.33e-25!94;UBERON:0003075!8.59e-24!86;UBERON:0007284!8.59e-24!86;UBERON:0000955!1.22e-23!69;UBERON:0006238!1.22e-23!69;UBERON:0002616!4.80e-23!59;UBERON:0000924!1.18e-22!173;UBERON:0006601!1.18e-22!173;UBERON:0001893!2.48e-20!34;UBERON:0002020!3.94e-20!34;UBERON:0003528!3.94e-20!34;UBERON:0001869!4.01e-20!32;UBERON:0004121!9.59e-20!169;UBERON:0002791!2.31e-19!33;UBERON:0000153!1.16e-18!129;UBERON:0007811!1.16e-18!129;UBERON:0000033!1.06e-16!123;UBERON:0003056!1.10e-16!61;UBERON:0000956!3.88e-15!25;UBERON:0000203!3.88e-15!25;UBERON:0001950!8.10e-14!20;UBERON:0002619!3.76e-12!22;UBERON:0000922!2.23e-11!612;UBERON:0002050!7.80e-11!605;UBERON:0005423!7.80e-11!605;UBERON:0000481!7.98e-11!347;UBERON:0000475!1.44e-10!365;UBERON:0000468!1.47e-10!659;UBERON:0000923!2.07e-10!604;UBERON:0005291!2.07e-10!604;UBERON:0006598!2.07e-10!604;UBERON:0002532!2.07e-10!604;UBERON:0000062!9.35e-09!511;UBERON:0000025!1.04e-08!194;UBERON:0000483!2.10e-08!309;UBERON:0000119!4.04e-08!312;UBERON:0000467!5.66e-08!625;UBERON:0000480!6.69e-08!626;UBERON:0004111!1.57e-07!241;UBERON:0000477!3.15e-07!286;UBERON:0001871!6.06e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.55e-15;49!UBERON:0002133;1.11e-14;2!UBERON:0000341;1.62e-14;2!UBERON:0002114;3.11e-10;2!UBERON:0003978;4.37e-10;3!UBERON:0000946;4.37e-10;3!UBERON:0002426;2.19e-08;1!UBERON:0003831;2.19e-08;1!UBERON:0003898;2.19e-08;1!UBERON:0004830;2.19e-08;1!UBERON:0003830;2.19e-08;1!UBERON:0005175;2.19e-08;1!UBERON:0001774;2.19e-08;1!UBERON:0001103;2.19e-08;1!UBERON:0002135;3.45e-08;1!UBERON:0002134;3.45e-08;1!UBERON:0005208;3.45e-08;1!UBERON:0004145;3.45e-08;1!UBERON:0005946;3.45e-08;1!UBERON:0005965;3.45e-08;1!UBERON:0002078;3.45e-08;1!UBERON:0007029;7.09e-08;1!UBERON:0000996;7.09e-08;1!UBERON:0002346;1.16e-07;4!UBERON:0000923;1.16e-07;4!UBERON:0010316;1.16e-07;4!UBERON:0005291;1.16e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,1.12e-14,2;UBERON:0000341,2.89e-14,2;UBERON:0002114,3.19e-10,2;UBERON:0003978,4.38e-10,3;UBERON:0009751,4.38e-10,3;UBERON:0000946,4.38e-10,3;UBERON:0002523,4.38e-10,3;UBERON:0005983,4.38e-10,3;UBERON:0002165,4.38e-10,3;UBERON:0002062,4.38e-10,3;UBERON:0007280,4.38e-10,3;UBERON:0002426,2.19e-08,1;UBERON:0003831,2.19e-08,1;UBERON:0003898,2.19e-08,1;UBERON:0004830,2.19e-08,1;UBERON:0003830,2.19e-08,1;UBERON:0005175,2.19e-08,1;UBERON:0001774,2.19e-08,1;UBERON:0001103,2.19e-08,1;UBERON:0010084,2.19e-08,1;UBERON:0002134,3.11e-08,1;UBERON:0005208,3.11e-08,1;UBERON:0005946,3.11e-08,1;UBERON:0005965,3.11e-08,1;UBERON:0002078,3.11e-08,1;UBERON:0002135,3.83e-08,1;UBERON:0007029,6.63e-08,1;UBERON:0000996,7.10e-08,1;UBERON:0001017,9.65e-08,81;UBERON:0002346,2.09e-07,86;UBERON:0001016,8.44e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14494394852423,0.684372125364421,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0.45071417671979,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,1.77866236955724,1.30139853857622,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32845119707087,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0.192190067365106,1.65896526242959,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0.19924798825107,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.371072392647405,1.99613798001194,0,0,0.724999575434793,0,0,0,0,0.291604613383254,0,2.65722415744152,0.361789315876224,0,0.331737779793674,0,0.219385397153973,0,0.278847488557207,0.230850775511391,0.341826167541004,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0.123563938946503,0,0.876214728748802,5.61804353109152,0.468528891450678,0,0.19566461893209,0,0,0,3.36680037793539,0.31593289814244,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0.696418755514666,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,2.23425921017803,0.458320848023367,2.87149209830726,0,0.429226048136571,0,0.671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0.91124334987037,0,0,0.104909176269996,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.387848869084652,0.52893040697076,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0,0.332787154610557,0.248385611765534,0,1.12482367165896,0,0.570930667089935,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,9.43543002049673,0,0.680117776536817,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,3.73411565898855,1.70059936081346,0.743614585554013,0,0,0,0,0.705351887381368,1.2249819094128,0.834979926253974,0,0.478901577171454,0.615349092722265,8.3183659753167,0.622415272177961,0.484426936895553,0,0.0981477185010256,0,0.550285795565037,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0,0.540300676947157,0,0.206686796501184,0.317079050969534,8.20462213527329,0,0,0.879356221798103,0,0.535701835878287,0,1.21393120847326,0.455324382702595,0.266107110487916,0,0.171488009437418,0.0679697329768317,0.197318320688547,0,0,0.156986185701028,0.314231179832004,0,0.913158720509496,0,0,0.142953088353313,0,0,1.73858272302579,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.923965261706223,4.6392577253528,1.45713297917742,0.701818390386317,0,0,0,0,0.301925687133347,0.154348316215889,0.437119121007915,0.470317296361523,0,0,0.588925401344836,0.891139200981258,1.2679671827502,0.679708458751268,0.0939839179798536,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0.315543124386369,0.339957450954573,7.41796173578642,2.645134202577,0,0.462175628631418,0,0,0,0,0,0,0,0,0.227336094654718,0,0.829169439458779,0.310298987585686,1.0661699095049,4.04709533488359,0.0645889098360061,0.372448285775147,0,0,0.808468755832877,0.653150243690884,0.684466602170562,0,0.143444410785353,1.66330178273007,0,0,0,0,0,0.244482888365733,0.406896178315738,1.33151354837103,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14494394852423,0.684372125364421,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0.45071417671979,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,1.77866236955724,1.30139853857622,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32845119707087,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0.192190067365106,1.65896526242959,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0.19924798825107,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.371072392647405,1.99613798001194,0,0,0.724999575434793,0,0,0,0,0.291604613383254,0,2.65722415744152,0.361789315876224,0,0.331737779793674,0,0.219385397153973,0,0.278847488557207,0.230850775511391,0.341826167541004,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0.123563938946503,0,0.876214728748802,5.61804353109152,0.468528891450678,0,0.19566461893209,0,0,0,3.36680037793539,0.31593289814244,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0.696418755514666,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,2.23425921017803,0.458320848023367,2.87149209830726,0,0.429226048136571,0,0.671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0.91124334987037,0,0,0.104909176269996,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.387848869084652,0.52893040697076,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0,0.332787154610557,0.248385611765534,0,1.12482367165896,0,0.570930667089935,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,9.43543002049673,0,0.680117776536817,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,3.73411565898855,1.70059936081346,0.743614585554013,0,0,0,0,0.705351887381368,1.2249819094128,0.834979926253974,0,0.478901577171454,0.615349092722265,8.3183659753167,0.622415272177961,0.484426936895553,0,0.0981477185010256,0,0.550285795565037,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0,0.540300676947157,0,0.206686796501184,0.317079050969534,8.20462213527329,0,0,0.879356221798103,0,0.535701835878287,0,1.21393120847326,0.455324382702595,0.266107110487916,0,0.171488009437418,0.0679697329768317,0.197318320688547,0,0,0.156986185701028,0.314231179832004,0,0.913158720509496,0,0,0.142953088353313,0,0,1.73858272302579,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.923965261706223,4.6392577253528,1.45713297917742,0.701818390386317,0,0,0,0,0.301925687133347,0.154348316215889,0.437119121007915,0.470317296361523,0,0,0.588925401344836,0.891139200981258,1.2679671827502,0.679708458751268,0.0939839179798536,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0.315543124386369,0.339957450954573,7.41796173578642,2.645134202577,0,0.462175628631418,0,0,0,0,0,0,0,0,0.227336094654718,0,0.829169439458779,0.310298987585686,1.0661699095049,4.04709533488359,0.0645889098360061,0.372448285775147,0,0,0.808468755832877,0.653150243690884,0.684466602170562,0,0.143444410785353,1.66330178273007,0,0,0,0,0,0.244482888365733,0.406896178315738,1.33151354837103,0.201273793591026,0 | ||
|short_description=p10@SOX6 | |||
}} | }} |
Latest revision as of 23:11, 16 September 2015
Short description: | p10@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SOX6_5end |
Coexpression cluster: | NA |
Association with transcript: | 72bp_to_ENST00000525835_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 1.12e-14 | 2 |
throat | 2.89e-14 | 2 |
duodenum | 3.19e-10 | 2 |
valve | 4.38e-10 | 3 |
cardiac mesenchyme | 4.38e-10 | 3 |
cardial valve | 4.38e-10 | 3 |
tunica intima | 4.38e-10 | 3 |
heart layer | 4.38e-10 | 3 |
endocardium | 4.38e-10 | 3 |
endocardial cushion | 4.38e-10 | 3 |
presumptive endocardium | 4.38e-10 | 3 |
chest muscle | 2.19e-08 | 1 |
respiratory system muscle | 2.19e-08 | 1 |
skeletal muscle of trunk | 2.19e-08 | 1 |
respiratory system skeletal muscle | 2.19e-08 | 1 |
thoracic segment muscle | 2.19e-08 | 1 |
chest organ | 2.19e-08 | 1 |
muscle of trunk | 2.19e-08 | 1 |
diaphragm | 2.19e-08 | 1 |
future diaphragm | 2.19e-08 | 1 |
tricuspid valve | 3.11e-08 | 1 |
right atrium valve | 3.11e-08 | 1 |
outflow tract of atrium | 3.11e-08 | 1 |
outflow part of right atrium | 3.11e-08 | 1 |
right cardiac atrium | 3.11e-08 | 1 |
mitral valve | 3.83e-08 | 1 |
surface | 6.63e-08 | 1 |
vagina | 7.10e-08 | 1 |
central nervous system | 9.65e-08 | 81 |
neurectoderm | 2.09e-07 | 86 |
nervous system | 8.44e-07 | 89 |