FFCP PHASE1:Hg19::chr11:16629650..16629667,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=55553 | |EntrezGene=55553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=16421 | |HGNC=16421 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-376bp_to_ENST00000525835_5end | |association_with_transcript=-376bp_to_ENST00000525835_5end | ||
|cluster_id=chr11:16629650..16629667,- | |||
|coexpression_cluster_id=C90 | |coexpression_cluster_id=C90 | ||
|description=CAGE_peak_22_at_SOX6_5end | |description=CAGE_peak_22_at_SOX6_5end |
Latest revision as of 23:16, 16 September 2015
Short description: | p22@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_SOX6_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | -376bp_to_ENST00000525835_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p22@SOX6 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 1.65e-12 | 2 |
pituitary gland | 3.62e-12 | 2 |
neurectoderm | 4.40e-09 | 86 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.69e-55 | 10 |
germ cell and embryonal cancer | 3.21e-25 | 22 |
germ cell cancer | 3.21e-25 | 22 |
peripheral nerve sheath neoplasm | 1.65e-12 | 2 |
neurofibroma | 1.65e-12 | 2 |
peripheral nervous system neoplasm | 8.96e-09 | 3 |
Showing 1 to 6 of 6 entries