FFCP PHASE1:Hg19::chr12:122439564..122439597,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144406 | |EntrezGene=144406 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28506 | |HGNC=28506 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000545988_5end | |association_with_transcript=-12bp_to_ENST00000545988_5end | ||
|cluster_id=chr12:122439564..122439597,+ | |||
|description=CAGE_peak_4_at_WDR66_5end | |description=CAGE_peak_4_at_WDR66_5end | ||
|id=chr12:122439564..122439597,+ | |id=chr12:122439564..122439597,+ | ||
|ontology_enrichment_celltype=CL:0002159!1.02e-19!13;CL:0000240!5.32e-17!6;CL:0000311!5.32e-17!6;CL:0000079!5.32e-17!6;CL:0000237!5.32e-17!6;CL:0000036!5.32e-17!6;CL:0000357!5.32e-17!6;CL:0000114!5.32e-17!6;CL:0000312!2.20e-13!5;CL:0002076!7.08e-12!43;CL:0002368!2.71e-11!13;CL:0002327!6.38e-11!4;CL:0000575!9.54e-10!2;CL:0000066!1.29e-09!254;CL:0000242!2.75e-09!2;CL:0002077!9.70e-09!33;CL:0000362!2.14e-08!8;CL:0000223!5.69e-08!59;CL:0002166!7.25e-07!3;CL:0002231!7.25e-07!3;CL:0000221!8.20e-07!71 | |ontology_enrichment_celltype=CL:0002159!1.02e-19!13;CL:0000240!5.32e-17!6;CL:0000311!5.32e-17!6;CL:0000079!5.32e-17!6;CL:0000237!5.32e-17!6;CL:0000036!5.32e-17!6;CL:0000357!5.32e-17!6;CL:0000114!5.32e-17!6;CL:0000312!2.20e-13!5;CL:0002076!7.08e-12!43;CL:0002368!2.71e-11!13;CL:0002327!6.38e-11!4;CL:0000575!9.54e-10!2;CL:0000066!1.29e-09!254;CL:0000242!2.75e-09!2;CL:0002077!9.70e-09!33;CL:0000362!2.14e-08!8;CL:0000223!5.69e-08!59;CL:0002166!7.25e-07!3;CL:0002231!7.25e-07!3;CL:0000221!8.20e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002327;5.71e-89;4!CL:0000575;5.69e-21;2!CL:0002623;1.83e-14;3!CL:0000622;3.22e-09;5!CL:0000154;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,5.72e-89,4;CL:0000575,6.96e-21,2;CL:0002623,1.60e-14,3;CL:0000622,2.97e-09,5;CL:0000154,6.34e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001911!6.38e-11!4;UBERON:0005333!6.38e-11!4;UBERON:0008425!6.38e-11!4;UBERON:0005311!6.38e-11!4;UBERON:0000076!5.44e-09!8;UBERON:0003101!3.42e-08!22;UBERON:0000079!3.42e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;5.71e-89;4!UBERON:0002365;5.99e-20;31!UBERON:0002330;5.99e-20;31!UBERON:0000964;3.42e-11;4!UBERON:0010409;3.42e-11;4!UBERON:0003100;4.28e-08;41!UBERON:0001044;6.78e-08;6!UBERON:0003293;6.78e-08;6!UBERON:0003294;6.78e-08;6!UBERON:0010047;6.78e-08;6!UBERON:0003408;6.78e-08;6!UBERON:0000167;6.78e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,5.72e-89,4;UBERON:0005333,5.72e-89,4;UBERON:0008425,5.72e-89,4;UBERON:0005311,5.72e-89,4;UBERON:0000076,4.34e-45,8;UBERON:0002365,4.17e-21,31;UBERON:0002330,4.17e-21,31;UBERON:0005085,4.62e-21,31;UBERON:0005157,3.70e-14,47;UBERON:0002530,1.91e-11,59;UBERON:0000964,3.79e-11,4;UBERON:0010409,3.79e-11,4;UBERON:0004348,3.79e-11,4;UBERON:0005427,3.79e-11,4;UBERON:0005153,1.77e-10,37;UBERON:0003100,1.56e-09,41;UBERON:0001044,6.34e-08,6;UBERON:0003293,6.34e-08,6;UBERON:0003294,6.34e-08,6;UBERON:0010047,6.34e-08,6;UBERON:0000167,6.34e-08,6 | |||
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| ||
|short_description=p4@WDR66 | |short_description=p4@WDR66 | ||
}} | }} |
Latest revision as of 23:31, 16 September 2015
Short description: | p4@WDR66 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_WDR66_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000545988_5end |
EntrezGene: | WDR66 |
HGNC: | 28506 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 5.72e-89 | 4 |
corneal epithelial cell | 6.96e-21 | 2 |
acinar cell of salivary gland | 1.60e-14 | 3 |
acinar cell | 2.97e-09 | 5 |
protein secreting cell | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 5.72e-89 | 4 |
mammary bud | 5.72e-89 | 4 |
mammary ridge | 5.72e-89 | 4 |
mammary placode | 5.72e-89 | 4 |
external ectoderm | 4.34e-45 | 8 |
exocrine gland | 4.17e-21 | 31 |
exocrine system | 4.17e-21 | 31 |
ectodermal placode | 4.62e-21 | 31 |
epithelial fold | 3.70e-14 | 47 |
gland | 1.91e-11 | 59 |
cornea | 3.79e-11 | 4 |
eye surface | 3.79e-11 | 4 |
optic eminence | 3.79e-11 | 4 |
corneal primordium | 3.79e-11 | 4 |
epithelial bud | 1.77e-10 | 37 |
female organism | 1.56e-09 | 41 |
saliva-secreting gland | 6.34e-08 | 6 |
gland of oral region | 6.34e-08 | 6 |
gland of foregut | 6.34e-08 | 6 |
oral gland | 6.34e-08 | 6 |
oral cavity | 6.34e-08 | 6 |