FFCP PHASE1:Hg19::chr4:183164574..183164586,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55714 | |EntrezGene=55714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29944 | |HGNC=29944 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000511685_5end | |association_with_transcript=0bp_to_ENST00000511685_5end | ||
|cluster_id=chr4:183164574..183164586,+ | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_8_at_ODZ3_5end | |description=CAGE_peak_8_at_ODZ3_5end | ||
|id=chr4:183164574..183164586,+ | |id=chr4:183164574..183164586,+ | ||
|ontology_enrichment_celltype=CL:0000077!8.30e-18!19;CL:0002541!7.82e-13!3;CL:0000039!3.52e-09!7;CL:0000586!3.52e-09!7;CL:0002097!1.33e-08!2 | |ontology_enrichment_celltype=CL:0000077!8.30e-18!19;CL:0002541!7.82e-13!3;CL:0000039!3.52e-09!7;CL:0000586!3.52e-09!7;CL:0002097!1.33e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.44e-24;3!CL:0002097;8.78e-16;2!CL:0000039;5.49e-11;7!CL:0000586;5.49e-11;7!CL:0000174;7.74e-11;3!CL:0000077;9.70e-10;19!CL:0000349;9.88e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.44e-24,3;CL:0002097,8.78e-16,2;CL:0000039,5.68e-11,7;CL:0000586,5.68e-11,7;CL:0000174,7.74e-11,3;CL:0000077,9.80e-10,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.58e-09;1!UBERON:0006238;7.14e-07;10 | |||
|ontology_enrichment_disease=DOID:162!9.84e-08!235;DOID:14566!1.98e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:170;4.97e-12;6!DOID:1799;1.89e-09;1!DOID:10165;1.89e-09;1!DOID:1798;1.89e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:170,4.98e-12,6;DOID:1799,1.89e-09,1;DOID:10165,1.89e-09,1;DOID:1798,1.89e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!7.82e-13!3;UBERON:0000920!7.82e-13!3;UBERON:0005631!1.48e-12!14;UBERON:0000158!1.48e-12!14;UBERON:0003124!2.03e-09!7;UBERON:0000478!8.29e-09!24;UBERON:0003350!7.01e-07!5 | |ontology_enrichment_uberon=UBERON:0000476!7.82e-13!3;UBERON:0000920!7.82e-13!3;UBERON:0005631!1.48e-12!14;UBERON:0000158!1.48e-12!14;UBERON:0003124!2.03e-09!7;UBERON:0000478!8.29e-09!24;UBERON:0003350!7.01e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.44e-24;3!UBERON:0000920;2.44e-24;3!UBERON:0005631;1.12e-12;10!UBERON:0000158;1.12e-12;10!UBERON:0002369;7.74e-11;3!UBERON:0001235;7.74e-11;3!UBERON:0006858;7.74e-11;3!UBERON:0001282;5.31e-09;1!UBERON:0009842;5.31e-09;1!UBERON:0003704;5.31e-09;1!UBERON:0001171;5.31e-09;1!UBERON:0001172;5.31e-09;1!UBERON:0000478;5.84e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.44e-24,3;UBERON:0003124,2.94e-18,7;UBERON:0005631,9.24e-14,14;UBERON:0000158,9.24e-14,14;UBERON:0002369,7.74e-11,3;UBERON:0001235,7.74e-11,3;UBERON:0006858,7.74e-11,3;UBERON:0001282,6.72e-09,1;UBERON:0009842,6.72e-09,1;UBERON:0003704,6.72e-09,1;UBERON:0001171,6.72e-09,1;UBERON:0001172,6.72e-09,1;UBERON:0000478,5.98e-08,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.55130299975552,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0.871533458600294,2.59929777073348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0,6.3406583151336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39278317278703,37.1207886064777,8.52697621892835,21.5121796405576,5.74202087517455,5.22106282390615,8.52855641629816,0,0,0,0,0,0,0,0,0.210998064528027,0,0.565412285735763,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,1.28254112402454,0,0,0,8.70478130860959,0,0,0,0,2.17446729717782,2.510468311496,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55582032678133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,1.34833881285112,1.07220795687463,0,0.453411851024545,0.694567422971502,0.244736704506468,0,0,2.41212454536578,0,0.964570191354574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.42864100133121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72549954683083,0,0,0,0,0,0,0,0,2.5224494698241,0,2.80705868584208,0,0,0,2.90603563420313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.55130299975552,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0.871533458600294,2.59929777073348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0,6.3406583151336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39278317278703,37.1207886064777,8.52697621892835,21.5121796405576,5.74202087517455,5.22106282390615,8.52855641629816,0,0,0,0,0,0,0,0,0.210998064528027,0,0.565412285735763,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,1.28254112402454,0,0,0,8.70478130860959,0,0,0,0,2.17446729717782,2.510468311496,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55582032678133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,1.34833881285112,1.07220795687463,0,0.453411851024545,0.694567422971502,0.244736704506468,0,0,2.41212454536578,0,0.964570191354574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.42864100133121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72549954683083,0,0,0,0,0,0,0,0,2.5224494698241,0,2.80705868584208,0,0,0,2.90603563420313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@ODZ3 | |short_description=p8@ODZ3 | ||
}} | }} |
Latest revision as of 23:46, 16 September 2015
Short description: | p8@ODZ3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ODZ3_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | 0bp_to_ENST00000511685_5end |
EntrezGene: | ODZ3 |
HGNC: | 29944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.44e-24 | 3 |
cortical cell of adrenal gland | 8.78e-16 | 2 |
germ line cell | 5.68e-11 | 7 |
germ cell | 5.68e-11 | 7 |
steroid hormone secreting cell | 7.74e-11 | 3 |
mesothelial cell | 9.80e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.44e-24 | 3 |
chorion | 2.94e-18 | 7 |
extraembryonic membrane | 9.24e-14 | 14 |
membranous layer | 9.24e-14 | 14 |
adrenal gland | 7.74e-11 | 3 |
adrenal cortex | 7.74e-11 | 3 |
adrenal/interrenal gland | 7.74e-11 | 3 |
intralobular bile duct | 6.72e-09 | 1 |
acinus | 6.72e-09 | 1 |
intrahepatic bile duct | 6.72e-09 | 1 |
portal lobule | 6.72e-09 | 1 |
hepatic acinus | 6.72e-09 | 1 |
extraembryonic structure | 5.98e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 4.98e-12 | 6 |
islet cell tumor | 1.89e-09 | 1 |
endocrine pancreas cancer | 1.89e-09 | 1 |
pancreatic endocrine carcinoma | 1.89e-09 | 1 |