FFCP PHASE1:Hg19::chr12:122907210..122907225,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6249 | |EntrezGene=6249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10461 | |HGNC=10461 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000537178_5end | |association_with_transcript=-31bp_to_ENST00000537178_5end | ||
|cluster_id=chr12:122907210..122907225,- | |||
|description=CAGE_peak_2_at_CLIP1_5end | |description=CAGE_peak_2_at_CLIP1_5end | ||
|id=chr12:122907210..122907225,- | |id=chr12:122907210..122907225,- | ||
|ontology_enrichment_celltype=CL:0000860;2.83e-12;33!CL:0002057;2.83e-12;33!CL:0000473;3.30e-09;39!CL:0000234;3.30e-09;39!CL:0000576;7.80e-07;48 | |ontology_enrichment_celltype=CL:0002057!2.97e-12!42;CL:0000860!3.87e-11!45;CL:0000766!7.28e-10!76;CL:0000557!6.39e-09!71;CL:0002194!9.10e-09!63;CL:0000576!9.10e-09!63;CL:0000040!9.10e-09!63;CL:0000559!9.10e-09!63;CL:0002009!1.46e-08!65;CL:0000839!4.20e-08!70 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;2.83e-12;33!CL:0002057;2.83e-12;33!CL:0000473;3.30e-09;39!CL:0000234;3.30e-09;39!CL:0000576;7.80e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.72e-12,42;CL:0002057,2.72e-12,42;CL:0000473,1.78e-10,48;CL:0000234,1.78e-10,48;CL:0000766,2.96e-10,72;CL:0000557,3.19e-09,67;CL:0002194,3.73e-09,59;CL:0000576,3.73e-09,59;CL:0000040,3.73e-09,59;CL:0000559,3.73e-09,59;CL:0002009,7.20e-09,61;CL:0000839,2.34e-08,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.32e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.67e-08!86;UBERON:0004765!9.07e-08!101;UBERON:0001434!9.07e-08!101;UBERON:0002371!9.54e-08!80;UBERON:0002390!1.87e-07!102;UBERON:0003061!1.87e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.56e-08,82;UBERON:0002371,5.73e-08,76;UBERON:0001434,8.53e-08,100;UBERON:0002390,2.09e-07,98;UBERON:0003061,2.09e-07,98;UBERON:0004765,4.65e-07,90 | |||
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| ||
|short_description=p2@CLIP1 | |short_description=p2@CLIP1 | ||
}} | }} |
Latest revision as of 00:09, 17 September 2015
Short description: | p2@CLIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENST00000537178_5end |
EntrezGene: | CLIP1 |
HGNC: | 10461 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.72e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.72e-12 | 42 |
defensive cell | 1.78e-10 | 48 |
phagocyte | 1.78e-10 | 48 |
myeloid leukocyte | 2.96e-10 | 72 |
granulocyte monocyte progenitor cell | 3.19e-09 | 67 |
monopoietic cell | 3.73e-09 | 59 |
monocyte | 3.73e-09 | 59 |
monoblast | 3.73e-09 | 59 |
promonocyte | 3.73e-09 | 59 |
macrophage dendritic cell progenitor | 7.20e-09 | 61 |
myeloid lineage restricted progenitor cell | 2.34e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.56e-08 | 82 |
bone marrow | 5.73e-08 | 76 |
skeletal system | 8.53e-08 | 100 |
hematopoietic system | 2.09e-07 | 98 |
blood island | 2.09e-07 | 98 |
skeletal element | 4.65e-07 | 90 |