FFCP PHASE2:Hg19::chr6:170862932..170862947,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6908 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11588 |TSSclas...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11588 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q7Z6S5 | ||
|association_with_transcript=-442bp_to_ENST00000421512_5end | |association_with_transcript=-442bp_to_ENST00000421512_5end | ||
|cluster_id=chr6:170862932..170862947,+ | |cluster_id=chr6:170862932..170862947,+ |
Latest revision as of 00:11, 17 September 2015
Short description: | p5@TBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TBP_5end |
Coexpression cluster: | C704_Eosinophils_CD14CD16_Neutrophils_CD14_CD4_Basophils_Peripheral |
Association with transcript: | -442bp_to_ENST00000421512_5end |
EntrezGene: | TBP |
HGNC: | 11588 |
UniProt: | Q7Z6S5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@TBP |
---|
0
2
4
6
8
10
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 3.16e-39 | 9 |
CD14-positive, CD16-positive monocyte | 3.16e-39 | 9 |
granulocyte | 4.74e-24 | 8 |
leukocyte | 1.22e-23 | 136 |
non-classical monocyte | 3.32e-18 | 3 |
CD14-low, CD16-positive monocyte | 3.32e-18 | 3 |
hematopoietic stem cell | 4.38e-18 | 168 |
hematopoietic oligopotent progenitor cell | 1.65e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.65e-17 | 161 |
blood cell | 2.37e-17 | 11 |
Showing 1 to 10 of 48 entries