FFCP PHASE1:Hg19::chr13:28961673..28961683,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=2321 | |EntrezGene=2321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=3763 | |HGNC=3763 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-195bp_to_AK092472_5end | |association_with_transcript=-195bp_to_AK092472_5end | ||
|cluster_id=chr13:28961673..28961683,- | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_16_at_FLT1_5end | |description=CAGE_peak_16_at_FLT1_5end | ||
Latest revision as of 00:19, 17 September 2015
| Short description: | p16@FLT1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_16_at_FLT1_5end |
| Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
| Association with transcript: | -195bp_to_AK092472_5end |
| EntrezGene: | FLT1 |
| HGNC: | 3763 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p16@FLT1 |
|---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| chorionic membrane mesenchymal stem cell | 8.98e-131 | 3 |
| extraembryonic cell | 5.37e-22 | 19 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| egg chorion | 8.98e-131 | 3 |
| chorion | 4.76e-57 | 7 |
| extraembryonic membrane | 2.55e-29 | 14 |
| membranous layer | 2.55e-29 | 14 |
| extraembryonic structure | 1.03e-17 | 24 |
| organ component layer | 2.96e-07 | 66 |
Showing 1 to 6 of 6 entries
