FFCP PHASE1:Hg19::chr10:128358905..128358916,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118611 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26563 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=98bp_to_ENST00000488181_5end | |||
|cluster_id=chr10:128358905..128358916,- | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_10_at_C10orf90_5end | |||
|id=chr10:128358905..128358916,- | |||
|ontology_enrichment_celltype=CL:0000148!1.12e-15!10;CL:0000541!1.12e-15!10;CL:0000147!5.39e-11!14;CL:0000710!1.77e-07!20;CL:0002567!5.14e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.74e-70;10!CL:0000147;2.07e-50;14!CL:0002567;1.49e-38;3!CL:0000710;1.77e-35;20!CL:0000075;2.00e-26;27!CL:0002077;6.72e-20;34!CL:0000149;2.43e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.16e-70,10;CL:0000541,3.16e-70,10;CL:0000147,2.29e-50,14;CL:0002567,1.49e-38,3;CL:0000710,1.90e-35,20;CL:0000075,2.11e-26,27;CL:0002077,4.53e-21,34;CL:0000333,9.37e-17,41;CL:0000133,6.36e-12,59;CL:0000221,6.95e-10,72;CL:0000149,2.61e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;4.73e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!3.66e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.58e-57;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.69e-57,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.61e-61!57;UBERON:0005068!3.61e-61!57;UBERON:0006241!3.61e-61!57;UBERON:0007135!3.61e-61!57;UBERON:0002616!1.13e-50!59;UBERON:0005743!1.28e-49!86;UBERON:0001017!5.04e-49!82;UBERON:0000955!2.28e-48!69;UBERON:0006238!2.28e-48!69;UBERON:0001893!2.32e-46!34;UBERON:0002020!4.69e-46!34;UBERON:0003528!4.69e-46!34;UBERON:0002780!7.62e-46!41;UBERON:0001890!7.62e-46!41;UBERON:0006240!7.62e-46!41;UBERON:0003080!1.20e-44!42;UBERON:0000073!2.87e-44!94;UBERON:0001016!2.87e-44!94;UBERON:0002791!4.02e-43!33;UBERON:0003075!3.23e-41!86;UBERON:0007284!3.23e-41!86;UBERON:0001869!6.31e-40!32;UBERON:0002346!4.51e-39!90;UBERON:0007023!1.89e-38!115;UBERON:0003056!3.45e-32!61;UBERON:0002619!1.91e-31!22;UBERON:0000033!3.33e-30!123;UBERON:0001950!1.09e-29!20;UBERON:0000153!1.85e-28!129;UBERON:0007811!1.85e-28!129;UBERON:0000956!1.89e-27!25;UBERON:0000203!1.89e-27!25;UBERON:0004121!1.67e-26!169;UBERON:0000924!1.04e-25!173;UBERON:0006601!1.04e-25!173;UBERON:0002298!8.14e-25!8;UBERON:0002308!2.31e-21!9;UBERON:0000125!2.31e-21!9;UBERON:0000200!5.69e-17!6;UBERON:0003076!5.77e-17!15;UBERON:0003057!5.77e-17!15;UBERON:0002420!6.54e-16!9;UBERON:0007245!6.54e-16!9;UBERON:0010009!6.54e-16!9;UBERON:0010011!6.54e-16!9;UBERON:0000454!6.54e-16!9;UBERON:0009663!1.89e-14!7;UBERON:0001872!1.93e-13!5;UBERON:0001896!2.42e-13!3;UBERON:0005290!2.42e-13!3;UBERON:0010096!2.42e-13!3;UBERON:0000988!3.38e-13!3;UBERON:0000025!4.55e-13!194;UBERON:0006331!7.12e-13!3;UBERON:0002771!7.42e-13!3;UBERON:0001871!1.47e-12!7;UBERON:0004733!4.41e-12!12;UBERON:0002028!4.41e-12!12;UBERON:0007277!4.41e-12!12;UBERON:0004732!4.20e-11!13;UBERON:0004111!4.84e-10!241;UBERON:0000369!1.33e-09!4;UBERON:0002435!1.33e-09!4;UBERON:0000204!1.33e-09!4;UBERON:0010082!1.33e-09!4;UBERON:0002148!3.84e-09!2;UBERON:0009662!3.84e-09!2;UBERON:0000349!4.28e-08!5;UBERON:0000477!4.56e-08!286;UBERON:0000475!6.23e-08!365;UBERON:0000483!9.35e-08!309;UBERON:0000119!1.31e-07!312;UBERON:0000064!2.88e-07!219;UBERON:0002240!7.05e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.47e-08;15!UBERON:0007376;1.47e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.42e-08,15;UBERON:0007376,1.42e-08,15;UBERON:0007383,1.42e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63497894292169,2.29193055334967,2.34434894420094,0,1.64523988325318,1.20137223137567,4.57322292208925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876214728748802,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.751145584238999,0.573409195690071,0.554645257684261,0.620964029413834,0,0,6.06596470166591,1.99825733481477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0.781078098613847,0.206686796501184,0.507326481551255,0,0,0,0,0,0,0,0,0,0,0,0,0.815636795721981,0.394636641377094,0,0,0,0.314231179832004,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981542335574726,0.891139200981258,0,0,0,0,0,0,0,0,0,0.458729283404541,0.430018749454354,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@C10orf90 | |||
}} |
Latest revision as of 00:40, 17 September 2015
Short description: | p10@C10orf90 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_C10orf90_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 98bp_to_ENST00000488181_5end |
EntrezGene: | C10orf90 |
HGNC: | 26563 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.16e-70 | 10 |
melanoblast | 3.16e-70 | 10 |
pigment cell | 2.29e-50 | 14 |
light melanocyte | 1.49e-38 | 3 |
neurecto-epithelial cell | 1.90e-35 | 20 |
columnar/cuboidal epithelial cell | 2.11e-26 | 27 |
ecto-epithelial cell | 4.53e-21 | 34 |
migratory neural crest cell | 9.37e-17 | 41 |
neurectodermal cell | 6.36e-12 | 59 |
ectodermal cell | 6.95e-10 | 72 |
visual pigment cell | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.42e-08 | 15 |
outer epithelium | 1.42e-08 | 15 |
enveloping layer of ectoderm | 1.42e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.69e-57 | 2 |