FFCP PHASE1:Hg19::chr5:172662230..172662241,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:172662230..172662241,-
|short_description=p3@NKX2-5
|description=CAGE_peak_3_at_NKX2-5_5end
|association_with_transcript=20bp_to_uc003mcm.1,uc010jjt.1,uc01...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1482 | |EntrezGene=1482 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2488 | |HGNC=2488 | ||
|TSSclassifier=strong | |||
|UniProt=P52952 | |UniProt=P52952 | ||
|association_with_transcript=20bp_to_uc003mcm.1,uc010jjt.1,uc011dfe.1_5end | |||
|cluster_id=chr5:172662230..172662241,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_3_at_NKX2-5_5end | |||
|id=chr5:172662230..172662241,- | |||
|ontology_enrichment_celltype=CL:0000066!3.42e-08!254;CL:0000076!5.27e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000077;3.65e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.35e-10,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!4.88e-16!143;DOID:162!3.85e-13!235;DOID:14566!5.06e-13!239;DOID:305!1.85e-11!106 | |||
|ontology_enrichment_disease_v019=DOID:114;2.01e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.11e-12,235;DOID:14566,2.10e-11,239;DOID:0050687,4.72e-11,143;DOID:114,1.99e-07,2;DOID:154,7.65e-07,2;DOID:4236,7.65e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007100!3.74e-08!27;UBERON:0001048!4.90e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.14e-10;25!UBERON:0001723;6.55e-09;3!UBERON:0001033;6.55e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.88e-09,27;UBERON:0001723,7.53e-09,3;UBERON:0001033,7.53e-09,3;UBERON:0010056,7.53e-09,3;UBERON:0000945,2.79e-08,8;UBERON:0010039,2.79e-08,8;UBERON:0003103,3.53e-07,68 | |||
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| ||
|short_description=p3@NKX2-5 | |||
}} | }} |
Latest revision as of 01:39, 17 September 2015
Short description: | p3@NKX2-5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NKX2-5_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 20bp_to_uc003mcm.1, uc010jjt.1, uc011dfe.1_5end |
EntrezGene: | NKX2-5 |
HGNC: | 2488 |
UniProt: | P52952 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.35e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.88e-09 | 27 |
tongue | 7.53e-09 | 3 |
gustatory system | 7.53e-09 | 3 |
future tongue | 7.53e-09 | 3 |
stomach | 2.79e-08 | 8 |
food storage organ | 2.79e-08 | 8 |
compound organ | 3.53e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.11e-12 | 235 |
disease of cellular proliferation | 2.10e-11 | 239 |
cell type cancer | 4.72e-11 | 143 |
heart disease | 1.99e-07 | 2 |
mixed cell type cancer | 7.65e-07 | 2 |
carcinosarcoma | 7.65e-07 | 2 |