FFCP PHASE1:Hg19::chr2:37551500..37551518,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23683 | |EntrezGene=23683 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9408 | |HGNC=9408 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000477132_5end | |association_with_transcript=0bp_to_ENST00000477132_5end | ||
|cluster_id=chr2:37551500..37551518,- | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_9_at_PRKD3_5end | |description=CAGE_peak_9_at_PRKD3_5end | ||
|id=chr2:37551500..37551518,- | |id=chr2:37551500..37551518,- | ||
|ontology_enrichment_celltype=CL:0000148!1.72e-08!10;CL:0000541!1.72e-08!10 | |ontology_enrichment_celltype=CL:0000148!1.72e-08!10;CL:0000541!1.72e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.54e-29;10!CL:0000147;4.06e-21;14!CL:0002567;1.88e-16;3!CL:0000710;8.80e-15;20!CL:0002566;1.93e-13;1!CL:0000075;6.19e-11;27!CL:0002077;7.54e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.84e-29,10;CL:0000541,1.84e-29,10;CL:0000147,4.61e-21,14;CL:0002567,2.38e-16,3;CL:0000710,9.61e-15,20;CL:0002566,1.82e-13,1;CL:0000075,6.60e-11,27;CL:0002077,1.22e-08,34;CL:0000333,8.34e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;2.15e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.15e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.23e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.22e-07,8 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,1.31694240986513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,1.1384259382189,0,0,1.32171328579026,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.392937226493138,0,0,0.649094787309367,0,0.26591592103773,0,0.571994910780128,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0,0,0.144119953416961,0.12624243342638,7.93723678652113,1.14596527667483,1.17217447210047,0,0.205654985406647,7.50857644609794,3.14409075893636,0,0.43596006883328,0,0.517086863031111,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0.640986253728404,0.082509499920588,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.636406495851874,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0.0711418433484141,0,0.59873811429845,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0.211125408127993,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0.104421949505455,0.067401132980677,0.802577647298789,0.234264445725339,0.182454789215666,0,0,0,0,0,0.252746318513952,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0.482259445395058,0,0.415440338029185,0.2249738915515,0,0.0607495566580247,0,0,0.157363764404994,0,0.537862017998534,0,0,0,0.25426853765475,0,0,0,0,0.246277562248017,0.170388021785422,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0.414239055347196,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0.249960815924213,0,17.413385346243,0,0,0.144921028610825,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.215649622793364,0.157265941855896,0,0,0.425149840203366,0.123935764259002,0,0,0.23658523500376,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0.0887023701626388,0.576169937778896,0,0.0679697329768317,0,0,0.111231401892069,0.156986185701028,0.157115589916002,0,0,0,0,0.357382720883282,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0.233939463462106,0,0,0.45178432815584,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.375935671919414,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0,0,0,0,0.252332849670158,0.109265571963696,0.126698501011437,0,0,0,0,1.89446745545599,2.14371304124943,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.202056159043763,0.143444410785353,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,1.31694240986513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,1.1384259382189,0,0,1.32171328579026,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.392937226493138,0,0,0.649094787309367,0,0.26591592103773,0,0.571994910780128,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0,0,0.144119953416961,0.12624243342638,7.93723678652113,1.14596527667483,1.17217447210047,0,0.205654985406647,7.50857644609794,3.14409075893636,0,0.43596006883328,0,0.517086863031111,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0.640986253728404,0.082509499920588,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.636406495851874,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0.0711418433484141,0,0.59873811429845,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0.211125408127993,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0.104421949505455,0.067401132980677,0.802577647298789,0.234264445725339,0.182454789215666,0,0,0,0,0,0.252746318513952,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0.482259445395058,0,0.415440338029185,0.2249738915515,0,0.0607495566580247,0,0,0.157363764404994,0,0.537862017998534,0,0,0,0.25426853765475,0,0,0,0,0.246277562248017,0.170388021785422,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0.414239055347196,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0.249960815924213,0,17.413385346243,0,0,0.144921028610825,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.215649622793364,0.157265941855896,0,0,0.425149840203366,0.123935764259002,0,0,0.23658523500376,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0.0887023701626388,0.576169937778896,0,0.0679697329768317,0,0,0.111231401892069,0.156986185701028,0.157115589916002,0,0,0,0,0.357382720883282,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0.233939463462106,0,0,0.45178432815584,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.375935671919414,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0,0,0,0,0.252332849670158,0.109265571963696,0.126698501011437,0,0,0,0,1.89446745545599,2.14371304124943,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.202056159043763,0.143444410785353,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p9@PRKD3 | |short_description=p9@PRKD3 | ||
}} | }} |
Latest revision as of 02:07, 17 September 2015
Short description: | p9@PRKD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PRKD3_5end |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | 0bp_to_ENST00000477132_5end |
EntrezGene: | PRKD3 |
HGNC: | 9408 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.84e-29 | 10 |
melanoblast | 1.84e-29 | 10 |
pigment cell | 4.61e-21 | 14 |
light melanocyte | 2.38e-16 | 3 |
neurecto-epithelial cell | 9.61e-15 | 20 |
dark melanocyte | 1.82e-13 | 1 |
columnar/cuboidal epithelial cell | 6.60e-11 | 27 |
ecto-epithelial cell | 1.22e-08 | 34 |
migratory neural crest cell | 8.34e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
testis | 7.22e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.15e-07 | 2 |