FFCP PHASE1:Hg19::chr2:37551526..37551556,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23683 | |EntrezGene=23683 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9408 | |HGNC=9408 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENST00000477132_5end | |association_with_transcript=-13bp_to_ENST00000477132_5end | ||
|cluster_id=chr2:37551526..37551556,- | |||
|coexpression_cluster_id=C3388 | |||
|description=CAGE_peak_3_at_PRKD3_5end | |description=CAGE_peak_3_at_PRKD3_5end | ||
|id=chr2:37551526..37551556,- | |id=chr2:37551526..37551556,- | ||
|ontology_enrichment_celltype=CL:0000542!6.49e-08!53;CL:0000051!6.49e-08!53;CL:0000838!1.61e-07!52;CL:0000236!4.28e-07!14 | |ontology_enrichment_celltype=CL:0000542!6.49e-08!53;CL:0000051!6.49e-08!53;CL:0000838!1.61e-07!52;CL:0000236!4.28e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.74e-12;24!CL:0000148;5.20e-12;10!CL:0000236;7.23e-11;13!CL:0000147;3.21e-08;14!CL:0000542;5.65e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,8.87e-13,14;CL:0000945,2.80e-12,24;CL:0000826,2.80e-12,24;CL:0000148,6.04e-12,10;CL:0000541,6.04e-12,10;CL:0000542,1.03e-11,53;CL:0000051,1.03e-11,53;CL:0000838,9.78e-11,52;CL:0000147,3.55e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000051;5.65e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0,0.487932798790507,0.738726348460727,0.408001382488506,0.313454721478088,0.286235987131057,0.684372125364421,0.125542639594803,0,0.0821005894499457,0.236132343941038,0,0.383829398097213,0.309632246632152,0,0,0,4.41563043307719,1.13735385989937,0.880801318004542,0,0,0.434021741431704,0,0.647787332037959,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0.182664153764634,3.51992488922645,1.63841583378639,1.77901850772711,1.28019066769952,0.400395987036012,1.14950487990897,0.661044872784862,0,2.84606484554724,2.34894875748376,3.82273228125229,0,3.36305137788922,0.790152254325231,0.196709770113833,0.786021525498329,0,0,0.32592226663359,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0.318565414324097,0.651083453856419,0.950452044448374,0.301150238155546,0.255973222308837,1.24930726552346,0.473554504088034,0,1.81446068902259,0.267440195783507,1.30341963494519,0,1.34140171940727,0.511450247374121,0,0,0,0.795285947051099,0.486634870302636,0.283604451492204,0.221729397462564,0.43917392846563,0.196468613246569,0,0,2.92092654289215,0.522389211897802,1.86141144726411,0.715471872916026,0,0,0.198762407366705,0.860234595106124,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0,0.357198913136319,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,0.397227542439656,0.286836620748814,0.709336764396714,0,0,0,1.24484414159907,0.67355336034844,0.490385709340376,0,1.15235184896,0,0.312160076830321,0.570471821544449,0.298897361103602,0.23486899728753,0.323745888736263,0,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0.453728732640084,0,0.213557388818567,0.423863802319124,0.600182192168805,0.412210116953756,0.257640540045629,0.744467425326359,0.843881661206331,0.0974370051611986,0.504867548488229,0.368199594569197,0.646584227275248,0.355009592516614,0.302256294682921,0,0,0,0.286804595389004,0.365921118388786,0.927708378250397,1.04574548582567,0.725627385107593,0.756962552626885,1.09493207722749,0,0,0,0,1.44375896333917,0,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0,0,0,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0.234817388471643,0,0,0,0,0.858486162094873,0,0.936017060556951,0.148631162288728,0,0,0,0.0895585227028483,0,0,3.4486426652716,0.176096868026452,0.414656231081544,0.720599767084807,0.12624243342638,32.8284113490514,5.34783795781589,2.34434894420094,0,1.54241239054985,28.5325904951722,8.28896654628677,0.224262168690721,0,1.1734125731352,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0,0,0.65147236858747,0,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.537182889719687,0.560425719967636,1.57624608161542,0.862510299438069,3.08023287071396,0.508189248444927,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.788512075169673,0.35142424497814,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0,0,0.620304078368662,0,0.74709290462411,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.308419387605311,1.24293207719189,0.821271560138091,0.519254429183621,0.348631135379878,0.483437798366489,0,0,0.114814448164607,0.364182336013434,0.393373244878272,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.103041011647722,2.28923662045859,2.31026599777646,0,0,0,0,0.462145851343933,0.15350367472613,0.137836572484531,0.214840489736547,0.290033387828457,0.596586391912706,0.356128142586949,0,0.192190067365106,0,0,0,0,0,0.616067160352178,0,0,0,0.286249773483982,1.116475108079,0.949138274156178,0,0,0,0.636406495851874,0.78494864019923,0,0.54907405947211,0.353437207037059,0,0,0,0,0.243713489631284,0,0.545999645631943,0.141405431953713,0,0,1.32687795048244,0,0,0,0.405820753925408,0,0,0.430234056612155,0,0.35667105148125,0,0,0,0.379473173765715,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0,0,0.714695326373367,0,0,0,0,0,0,0.490080431962063,1.11481905075431,0.432807638929335,0.711418433484141,0,0.59873811429845,1.1490322207942,1.05836791361941,0.324621940274555,0,0,0,0,1.18504244461122,0.1605880751037,0.201799707191048,1.27753871307098,0.343505344755765,0,0,0.333698283423817,0,0,0,0.540911356951966,0.33307196799782,0,0,0.146508179271894,0.242721043499027,0,0.852408440419239,0,0.296964680832639,0,0,0.281338832821026,0.333926115068718,0,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| ||
|short_description=p3@PRKD3 | |short_description=p3@PRKD3 | ||
}} | }} |
Latest revision as of 02:08, 17 September 2015
Short description: | p3@PRKD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRKD3_5end |
Coexpression cluster: | C3388_melanoma_Melanocyte_Mast_leiomyoblastoma_Burkitt_small_lymphoma |
Association with transcript: | -13bp_to_ENST00000477132_5end |
EntrezGene: | PRKD3 |
HGNC: | 9408 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 8.87e-13 | 14 |
lymphocyte of B lineage | 2.80e-12 | 24 |
pro-B cell | 2.80e-12 | 24 |
melanocyte | 6.04e-12 | 10 |
melanoblast | 6.04e-12 | 10 |
lymphocyte | 1.03e-11 | 53 |
common lymphoid progenitor | 1.03e-11 | 53 |
lymphoid lineage restricted progenitor cell | 9.78e-11 | 52 |
pigment cell | 3.55e-08 | 14 |